Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1619 ATGAAGTTCTTCCAATTTCCCATTTTTCCATTTATTATTCTGCTAAGTTTCATATTGGTTGTAGCAGCTGACTTGAACTCTGACAAACAAGCACTCCTTGATTTTTCTTCTAATGTTCCCCACCCTCCAAGGCTAAACTGGAGTGCAACTACTCCAATTTGCACATCATGGACTGGAGTGATGTGCAATGCGAATCAAACTCGTGTCATCGGCGTCCACCTTCCGGGGATTGGACTCAAAGGGTTGATTCCATCGAAAACCATAGGAAAACTAGATGCTCTTATAACCCTGAGCCTTCATTCCAATGGTCTTAGAGGAAATCTTCCTTCTGACATTTTCTCCATTCCTTCACTCCAATATGTGCATCTTCAGCACAATAACTTCTCAGGTCTAATCCCTTCTTTCGTGTCTCCGAAACTCGTTGTTTTTGATGTTTCCTTTAACAACTTCTCAGGCAACATTCCACCAACATTTCAGAATCTTAGACGTCTCACATGGTTGTATCTCCAAAAGAACTCCCTCTCTGGAGTTATCCCTGAGTTCAACCTTCCAATGCTCAAATTCTTGAATCTGAGCTATAACAACTTGAATGGTTCAGTTCCAGATTCCATCAAACAATTTCCTTATACTTCTTTTGTTGGAAATTCTCTCTTATGTGGTCCACCTCTCAATCATTGTTCTGCAATCTCTCCTTCTCTGTCTCCATCCTCTTCTCCCGTTTACCAACCACTTTCTCCAGAAACTAACCAAAATCAAAAGGCTACAGCATCTAAGAAACGCTTCGGCATAGCTACTGTTCTTGCTCTTGTAATTGGTGGCTGTGCCTTCCTCTCTCTTTTAGTTCTATTTATCTCTGTATGCTGTTTGAAGAGGAAAAACAGTGAAACGAGTGGAATACTTAAAGGGAAAACATCTTGTGCCGGAAAGACCGAGGTTTCAAAGAGTTTTGGCAGCGGGGTGCAAGCAGCTGAAAAGAACAAGTTGTTCTTCTTTGAAGGCTTTACTAACAGCTTTGACCTCGAAGATTTGTTGAAAGCCTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGAACAACATACAAGGCCACTCTGGAGGATGGAACAGCAGTAGTGGTCAAGCGGTTGAGGGAAGTTGTGGCCGGAAAGAAGGAGTTTGAGCAGCAGATGGAACTCGTTGGAAGGATCGGAAGACACCCGAATGTCGTTCCTCTTAGAGCTTATTATTACTCCAAAGATGAGAAACTTGTAGTTTATAACTACATGCCTGGAGGCAGCTTGTTTAGCCTTTTGCATGGAAACAGAGGTATAGGAAGAACTCCATTGGATTGGGATTCAAGAATGAAGATTGCACTTGGACTTGCAAAAGGAATTGCATTCATTCACTCTCAAGGAGGTCCAAAGTTCACTCATGGCAACATCAAGTCAACCAATCTTCTCATAACCCAAGAACTCGATGGCTGCATCACGGACGTAGGACTAACTCCTCTAATGAACACCCCTCCAACAATGTCGAGGGCTAACAACTACCTTGCACCAGAAGTTATTGAGTCAAGGAAAATCACCCCAAAGTCTGATGTCTACAGCTTCGGAGTGATCCTCCTTGAATTGCTCACAGGCAAGACTCCGCTTGGATACGCTGGATATGAAGACATGGTCGATCTTCCAAGGTGGGTGAGGTCCGTGGTGCGTGAGGAATGGACGGCTGAAGTTTTTGATGTGGAGCTGCTAAGAGGGAATTATGTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCATTGGCATGTGTGGCGAAGGTTGCAGATAATAGGCCAAGAATTGATGAAGCTGTTAGAACTATAGAGGAAATTAGGCAGCCTGAGTTGAGGAACCGTACTTCATCGGACTCCGAATCTAATCTGCAAACACCATAA 1911 0.4354 MKFFQFPIFPFIILLSFILVVAADLNSDKQALLDFSSNVPHPPRLNWSATTPICTSWTGVMCNANQTRVIGVHLPGIGLKGLIPSKTIGKLDALITLSLHSNGLRGNLPSDIFSIPSLQYVHLQHNNFSGLIPSFVSPKLVVFDVSFNNFSGNIPPTFQNLRRLTWLYLQKNSLSGVIPEFNLPMLKFLNLSYNNLNGSVPDSIKQFPYTSFVGNSLLCGPPLNHCSAISPSLSPSSSPVYQPLSPETNQNQKATASKKRFGIATVLALVIGGCAFLSLLVLFISVCCLKRKNSETSGILKGKTSCAGKTEVSKSFGSGVQAAEKNKLFFFEGFTNSFDLEDLLKASAEVLGKGSYGTTYKATLEDGTAVVVKRLREVVAGKKEFEQQMELVGRIGRHPNVVPLRAYYYSKDEKLVVYNYMPGGSLFSLLHGNRGIGRTPLDWDSRMKIALGLAKGIAFIHSQGGPKFTHGNIKSTNLLITQELDGCITDVGLTPLMNTPPTMSRANNYLAPEVIESRKITPKSDVYSFGVILLELLTGKTPLGYAGYEDMVDLPRWVRSVVREEWTAEVFDVELLRGNYVEEEMVQMLQIALACVAKVADNRPRIDEAVRTIEEIRQPELRNRTSSDSESNLQTP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1619 636 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Ahy17g1619 636 SUPERFAMILY Protein kinase-like (PK-like) 349 613 IPR011009 -
Ahy17g1619 636 Pfam Protein kinase domain 349 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1619 636 Gene3D Ribonuclease Inhibitor 139 228 IPR032675 -
Ahy17g1619 636 PANTHER OS05G0588300 PROTEIN 14 635 - -
Ahy17g1619 636 Gene3D Ribonuclease Inhibitor 26 138 IPR032675 -
Ahy17g1619 636 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1619 636 Gene3D Phosphorylase Kinase; domain 1 311 420 - -
Ahy17g1619 636 ProSitePatterns Protein kinases ATP-binding region signature. 351 382 IPR017441 GO:0005524
Ahy17g1619 636 Gene3D Transferase(Phosphotransferase) domain 1 421 634 - -
Ahy17g1619 636 CDD STKc_IRAK 351 616 - -
Ahy17g1619 636 PANTHER RECEPTOR-LIKE KINASE 14 635 - -
Ahy17g1619 636 SUPERFAMILY L domain-like 27 224 - -
Ahy17g1619 636 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1619 Ahy-Chr17 34041370 34045441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1619 1 631 Receptor kinase-like Gene Family AT5G58300 57.099 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy17g1619 Pkinase 1.30E-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1619 - - aprc:113868460 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1619 17 34041370 34045441 Ahy7g1809 7 67690533 67694581 hybridization
Ahy17g1619 17 34041370 34045441 Ahy10g1414 10 78292970 78296956 hybridization
Ahy17g1619 17 34041370 34045441 Ahy17g1619 17 34041370 34045441 PCT
Ahy17g1619 17 34041370 34045441 Ahy10g1414 10 78292970 78296956 PCT
Ahy7g1809 7 67690533 67694581 Ahy17g1619 17 34041370 34045441 PCT
Ahy17g1619 17 34041370 34045441 Ahy7g1809 7 67690533 67694581 PCT
Ahy10g1414 10 78292970 78296956 Ahy17g1619 17 34041370 34045441 PCT