Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1612 ATGGATTTCAATGGGATGTTTGGGGCCGAAGTGGAACAGTCAGATGAGAACAGCTCGGATGGATATTGTGGCCGTTATTATGCGAGTGATGACGAAGGTGGTGAGGAAGGTGACCCAACAGGGCACAGAGAAGATGAACATGGTAATTTCTCAGGTGGTGCCAGTCATGCAGGGGATGGTGGCAAAATTCGGCCGGTTGTGGCAGAGGATTTCCTAGGCAGAGAGTTTGTTGGGGAGGAGGATGCGTATCTTGCGTACAAGGAGTTTGCTAGGACGAGGGGTTTCGGGGTCCGCAAGGGAGATGTGGGGGAGGAGAGGTTGGAGAGTCGAACCGACTGCAAGGCGAAGTTGAAGATTTACTATGATGTGCAACGCAGTGTGTGGAAGGTCAGGACCATCTTCGATGAGCACAACCACGAGCTTGCTCCGACCATGTTTTCCCACCTCTTACCTAGCCATCGCAAGATGAGTAACGGCGACAAAGCGCAATTTGATAGCATGAAGAAGTTTGGGATACCAACCTCGAAGATAATGACTTACATGGCTGGTCAATCTGGAGGGTATGGAATGCTGCGATTTACAAAGCGTGATTTGTATAATTACGTACACGGGCAAAGGATGGCTCGAATCAATGATGGTGATGCTGCAGCAACGATCAGTTACTTGGAGGGCAAGGCAAATGCCGACATGACGACTGTGGCACGTTACACGCGAACTGCGGATAATCGGCTAGGGAGCCTTTTCTGGGTCGACGGTGAGATGATGTCGGACTATCAGTTATTTGGAGATGTTATGACTTTTGATTCGACGTATCGGTCTAATAAGTACAAGAAACCGCTTGTAGTGTTCTCCGGGTCAAATCACCACAAACAAACAACCATTTTTGGATTTGCGCTACTGGAGGATGAGGAAGTTTGTACTTACCGGTGGCTGTTGTTAAATCTTGTAGACGTAATGGGAGAGAAGACGTCGTGCGTTGTTGTCACGGATGGGGACAAAGCAATGCGCGCAGCCATCGCGGAGGTGTTCCCGGCAGCTAGGCACCGGCTGTGCGGGTGGCACTTGGAGAAAAACTGTGTTCAGAGGGTTAAGGATACTGAATTCCGGAAGGTCTTTAAGAAGGCTATGTATGCCAACTTCGAGGTGGAGGACTTTGAGGAATATTGGAAGAAGGCGGTGAAGTCACTTGGCCTTCAGAATAATAGTTGGGTTCAAAACACATACGAGCTCAAAGAAAGTTGGGCAACAGCATATCTCCGGGGCATGTTCTGTGCGGGATACAGGACAACCTCCAGGTGTGAGGGAATTAATACATACATAAAGGGGTTCCTGAAATCCACTAATAGCATTTTGGAGCTGGTGCACAGCTTAGATCGCGTTGTAAAGGATTATCGAAACAGCGAAGTCACGGCGCAGTTCTATTCTACGTATTATAGCCCAGTGTTAACAACCGGGCTTGACTCCATTGAGCTTTTTGCATCAAAACTGTACACGCGGGCAGTTTTTAGAGAGGTGAAGAAACAAATCAAGGGTGTTGCGACATTGTTGTTTCATGGGAGAGATAACATCAGCACAACGGTTGTCTACAAGTTTTCAAGGATGGGTGCCCCTGGTAGGATTCACAAGGTTTTGTTCGACCCCGATGACAAGAAAATTCAGTGCGACTGTTCGATGTGGAATAGCGAGGGTATTCCATGTAGTCACATTTTCTGCGTGATGAAACACGAGGGTTTGGATCAAATCCCGGACAGTCTTATAATGAGAAGATGGTGCAAGAATGCAAAAGATTCCAGCCGGATGCCGGTGACTACGAGACCTGGACATGAGGGTCGCATGCTTAGGTATGCCACACTTTGTTCGGCCACAAGCTTGGTCGCAAGACTTGGTTCGGAGGAGGGCGAAGACTTTGAATTCGCTAGGGAGAGCATCGCAAGTGTAATAGAAAAGCTACGTCACAGATTTTATGAGAGGGCAGGCGGTCAGCCAGTGGATTGTATTTTGAACAAAATCTTATACATGCCAACATGCTTGCATGATCAAACCTCGACTCATAGCGATGGTGGTCTCAATAACGTGTCTAGCTCAGCGGTGAATACATCCTCCATGGTGAATCGGAGAGGTAGTCCATCTTGGCGTCCTCCGTTCTGTGGCGGGGAAGTGGGGGACCTTCTTCCTTGGGGGCCAACACATCCACCAATTCTATGCATCCCAACCTTGCTCTGGGCACCAAAGCGAACCGCCGCCGCACGAAGGCCATTGCAGTATGGCGACTCCAACAAGGACAACGAATGA 2292 0.4891 MDFNGMFGAEVEQSDENSSDGYCGRYYASDDEGGEEGDPTGHREDEHGNFSGGASHAGDGGKIRPVVAEDFLGREFVGEEDAYLAYKEFARTRGFGVRKGDVGEERLESRTDCKAKLKIYYDVQRSVWKVRTIFDEHNHELAPTMFSHLLPSHRKMSNGDKAQFDSMKKFGIPTSKIMTYMAGQSGGYGMLRFTKRDLYNYVHGQRMARINDGDAAATISYLEGKANADMTTVARYTRTADNRLGSLFWVDGEMMSDYQLFGDVMTFDSTYRSNKYKKPLVVFSGSNHHKQTTIFGFALLEDEEVCTYRWLLLNLVDVMGEKTSCVVVTDGDKAMRAAIAEVFPAARHRLCGWHLEKNCVQRVKDTEFRKVFKKAMYANFEVEDFEEYWKKAVKSLGLQNNSWVQNTYELKESWATAYLRGMFCAGYRTTSRCEGINTYIKGFLKSTNSILELVHSLDRVVKDYRNSEVTAQFYSTYYSPVLTTGLDSIELFASKLYTRAVFREVKKQIKGVATLLFHGRDNISTTVVYKFSRMGAPGRIHKVLFDPDDKKIQCDCSMWNSEGIPCSHIFCVMKHEGLDQIPDSLIMRRWCKNAKDSSRMPVTTRPGHEGRMLRYATLCSATSLVARLGSEEGEDFEFARESIASVIEKLRHRFYERAGGQPVDCILNKILYMPTCLHDQTSTHSDGGLNNVSSSAVNTSSMVNRRGSPSWRPPFCGGEVGDLLPWGPTHPPILCIPTLLWAPKRTAAARRPLQYGDSNKDNE* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1612 763 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Ahy17g1612 763 SMART 26again6 552 579 IPR006564 GO:0008270
Ahy17g1612 763 Pfam MULE transposase domain 264 358 IPR018289 -
Ahy17g1612 763 PANTHER OS02G0262500 PROTEIN 109 598 - -
Ahy17g1612 763 MobiDBLite consensus disorder prediction 29 50 - -
Ahy17g1612 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 109 598 IPR031052 GO:0006355
Ahy17g1612 763 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1612 Ahy-Chr17 33734561 33737657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1612 MULE 9.00E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1612 - - ahf:112709549 1209.51