Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1597 ATGCCTGCAATTGCTGATCCTAACACCCACAAGCGCAAGTTAAGATCTTACGCGCCGCCACGCGCCGAATCTCCTTCCCCTTCCCCACCGAAATGGAAGTCGCCCCGCCCATCTGCTATTGCCAGCCCCCATTCTGCTGCAAATGGTAATGAAATTGTTGCTGATGAAAATCAAGGTGTATTGCGGAAACCTGACCTTGTGAAATCCCTTTGGAATCTGAAAGATGGTGAGCAATTGAGAGTGGTGAAGGAGGCATTGCACCTTGCAACTGCACCTTCTGCGGTTGTGTGTCGAGAAGAGGAGCAGGATATGGTTTTGGGGTTCTGCAAATCCTGCATTGAGCATGAGAAGGCTGGGAGCTTGTACATATGCGGGTGCCCCGGAACTGGAAAATCGTTGTCTATGGAGAAAGTGAAAGAGGCTTTACTCAATTGGGCAAAAGAGGGAGGTTTTCCACTGCCAGATGTTTTGTCAGTAAATTGTACATCCCTTGCCAATACATCAGATATTTTCACCAAGATACTTGGGTTAAGCCCTTCACGGGGAAGAAGGGTTTTGGCAACACCCTTGCAACAACTTCAGAACATGTATTCACAGAAATCTTCTACCAGGAATATGATGTTGATAGTTGCTGATGAGTTAGATTACCTAATAACCAGAGACCGGGCTGTGCTCCATGACCTTTTTATGCTTACCACCTTCCCATTTGCCAGATGTATATTAATAGGGGTAGCAAATGCTATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCTCTAAATTGCAAGCCTACTGTTGTAACTTTTCGTGCCTACTCTAAAGATCAAATCCTTAGGATTCTTGAAGAAAGGCTAAATGAACTTCCTTACACTGTCTTTCAACGTCAAGCACTAGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGGGATATGCGGAAAGCTCTTTGCATTTGTAGGAGTGCGATAGAGATGCTAGAAGCTGAAGTTAGAGAATCTGTATGCAATTTGAATACTCCATTGGAAGAGAAATCATCCTCTGAACAAAATATGGCTACAGTTTCTGATCCCATGAAGAAACAAGAATTTGATATTGTAAGGATTGATCATATGGCTCGTGCTTTGTCAAAGACATATAGATCACCAGTGGTGGATACTATACAATCTTTGCCACATCATCAACAGATTATACTTTGCTCGTCCATGAAACATTTCTGTGGATCTAAGAAAGATACAATCCTTGGAGAGCTGTATAAATCTTACTCTGAGTTATGCAAATCATCATTGATTCCCCCAACAGGAATCTTGGAATTCTCAAACATGTGCAGAGTGCTTAATGACCAGGGGCTCATTAAACTAGGACCATCACGAGAGGATAAATTGAAAAGGGTAACACCAAAAGTTGACGAGGCTGATATTACATTTGCATTGCAGGGAATCCGATTTTTTAGAAATTGTCTTCAATGA 1470 0.4272 MPAIADPNTHKRKLRSYAPPRAESPSPSPPKWKSPRPSAIASPHSAANGNEIVADENQGVLRKPDLVKSLWNLKDGEQLRVVKEALHLATAPSAVVCREEEQDMVLGFCKSCIEHEKAGSLYICGCPGTGKSLSMEKVKEALLNWAKEGGFPLPDVLSVNCTSLANTSDIFTKILGLSPSRGRRVLATPLQQLQNMYSQKSSTRNMMLIVADELDYLITRDRAVLHDLFMLTTFPFARCILIGVANAIDLADRFLPRLTSLNCKPTVVTFRAYSKDQILRILEERLNELPYTVFQRQALELCARKVAAASGDMRKALCICRSAIEMLEAEVRESVCNLNTPLEEKSSSEQNMATVSDPMKKQEFDIVRIDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFCGSKKDTILGELYKSYSELCKSSLIPPTGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTPKVDEADITFALQGIRFFRNCLQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1597 489 CDD AAA 101 259 - -
Ahy17g1597 489 Pfam AAA lid domain 295 329 IPR041083 -
Ahy17g1597 489 Pfam CDC6, C terminal winged helix domain 399 477 IPR015163 -
Ahy17g1597 489 PIRSF Cdc6 5 489 IPR016314 GO:0006270|GO:0051301
Ahy17g1597 489 CDD Cdc6_C 392 474 IPR015163 -
Ahy17g1597 489 Gene3D - 268 360 - -
Ahy17g1597 489 Gene3D - 384 474 IPR036388 -
Ahy17g1597 489 MobiDBLite consensus disorder prediction 1 45 - -
Ahy17g1597 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 335 IPR027417 -
Ahy17g1597 489 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 24 488 - -
Ahy17g1597 489 Pfam AAA domain 116 233 IPR003593 -
Ahy17g1597 489 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 24 488 - -
Ahy17g1597 489 SMART Cdc6_C_2 399 478 IPR015163 -
Ahy17g1597 489 Gene3D - 76 267 IPR027417 -
Ahy17g1597 489 MobiDBLite consensus disorder prediction 22 36 - -
Ahy17g1597 489 SUPERFAMILY "Winged helix" DNA-binding domain 384 487 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1597 Ahy-Chr17 32998118 33003845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1597 28 488 Core DNA Replication Machinery Family AT2G29680 61.489 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1597 K02213 - gmx:100791200 727.628