Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1570 ATGAAGAGTGTGAAGGAAAAGATGAAGTCATCACAAGCAATAGTGAGTATGTTAATGGTGCAAATATTCGCAACTGGGATGCAGCTTCTATCAAGAGTGATATTGGTTAATGGCACCTTCATTTTCGCACTCACTTCTTATCGCCATGTTGTTGCTGCTCTTTTTGTTGCCCCTTTTGCTCTTTACTTTGAAAGAGACAGGGAAAAGAAATTCACTTTGAAAGTATGGTTTTGGATCTTCATTAACGCTTTAACTGGAATGACAATGGCTCAGGGATTGTATTATTATGGGTTGAGGGACACTTCAGCTACTTACTCCATCAATTTTCTCAACCTGGTTCCAATATGCACATTTGCTGTGTCTATTATATGCAGAATGGAGAAACTGAGGGTGAAAACATGGGGTGGTAGAGCAAAGTGTGTGGGAGCAATATTGTGTGTTGGAGGTGCATTGGTTACAAGCCTTTACAAAGGCCATGAATTCTTCATTGGTCAACACCACCATGATTCTCATTCTTCTGCTTTGACTCACAAGACCAACATGCTTCGTGGAACTATCTTCTTGGTTCTTAGCTGCTTCTCATACACAGCTTGGTTCATTGTGCAAGTAAAGTTGCTGAAAGAATTTCCATTTAAATATTGGGGAACAATGCTAGCTTGTATTATGGCATCAATTCAATCTGTAGTAATTGGCTTATGCATAGATTCCAGCGGTGCTTCTTGGAAGATACACTGGAATCTACAGCTTGTTACTATACTCTATTCGGGAGTACTTGCTACGGGTGCAACATTTTGTTTACTTTCATGGGCTATTTCAGTAAAAGGACCAACATACCCTCCAATGTTTAATCCCCTTGCTCTTATTTTTGTGGCCATATCAGAAGCTCTCGTACTTGGTGAACCATTAAAAGTTGGAACGTTGTTGGGGATGGTTTTGATAATATCAGGATTGTACTCATTCTTGTGGGGAAAAAAGAAGGAACCAAAAAGCTTGGTTCAATCAAATGTGGTGGCGGCAGAAGTGTCAGCTGACTCTGCAGTGCCACAAGCACAAGCAACTGCTGTTGTAGTACCAAGAGTTTCTTCACCTACTAGTAATGTAGTTTTAGAGATAGAAACTACTAACAAGTAA 1131 0.4005 MKSVKEKMKSSQAIVSMLMVQIFATGMQLLSRVILVNGTFIFALTSYRHVVAALFVAPFALYFERDREKKFTLKVWFWIFINALTGMTMAQGLYYYGLRDTSATYSINFLNLVPICTFAVSIICRMEKLRVKTWGGRAKCVGAILCVGGALVTSLYKGHEFFIGQHHHDSHSSALTHKTNMLRGTIFLVLSCFSYTAWFIVQVKLLKEFPFKYWGTMLACIMASIQSVVIGLCIDSSGASWKIHWNLQLVTILYSGVLATGATFCLLSWAISVKGPTYPPMFNPLALIFVAISEALVLGEPLKVGTLLGMVLIISGLYSFLWGKKKEPKSLVQSNVVAAEVSADSAVPQAQATAVVVPRVSSPTSNVVLEIETTNK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1570 376 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020|GO:0016021
Ahy17g1570 376 Pfam EamA-like transporter family 14 149 IPR000620 GO:0016020|GO:0016021
Ahy17g1570 376 PANTHER WAT1-RELATED PROTEIN 11 339 IPR030184 GO:0016021|GO:0022857
Ahy17g1570 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
Ahy17g1570 376 PANTHER WAT1-RELATED PROTEIN 11 339 - -
Ahy17g1570 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1570 Ahy-Chr17 31994406 32003907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1570 15 325 Nodulin-like Gene Family AT1G09380 36.364 3.39e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1570 - - gmx:100782551 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1570 17 31994406 32003907 Ahy17g1570 17 31994406 32003907 PCT