Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1564 ATGGGTGCGGTGGAGGTGTTTCAACAGCAGCCGCTGGTGGTGGACGCTGCTCCGGTTTTGTCGCTGAACTCGCTGCCGTTGGGGTTCCGTTTCCGACCGACAGACGAGGAGCTCGTTGACTTTTACTTGCGGCAGAAGATCAACGGCAATGGCGATGAGGTTTGGGTCATTCGAGAAATCGATGTTTGCAAATGGGAACCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACAGGAAGTATCCAAATGGACACCGGCTGAACCGAGCAACAACTCATGGATATTGGAAGGCGACTGGCAAGGATCGGAAGATTAAGTCCGGCTCTACCGTGATTGGAATGAAGAAGACTCTTGTATTCTACACTGGCCGTGCTCCCAAAGGGAAGAGGACCAATTGGGTGATGCATGAGTACAGGCCTACCCTGCAGGAGCTTGATGGTACCAATCCTGGACAGAATCCATATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAGGTTCAAACGGTGAAGAAATGGAGCGTACTACTTCAACTAATTTAACTGCAAATTACTCTCCAGAAGAAATACAATCAGATCCAGCTGTTAAATCGGTTTCTTCTTCACAGGCTACAGAAGATGACAAGAAACTAGCAGTTATCCCTTTGACCCCTGAAGAAGCAATTTCCAATGTTATAACCCCGGTCGGTTGCCAAAACGATGGATGTGATGCTTATGATGCACAAAATCAAATCGCAGCAGGAGATCCATCTAAGGAGGAGGACTTACAAGTGAACATGGACATATTTTATGACCCGAGTGAGCTATTTGACGATAAATTATTCTCCCCACTCCACAAGCATATTCCAGAAGAACTTTTTCATCAATCAAACAATGAAGCCAATGGACATTTTGGGCTGCAACATCAGTGTGGAACAAATGAGATCAGTATTTCTGACTTCTTTGACTCTGTTATTAATTGGGATGAGATCTCCGGTGACAATTCCAGCGGCCAAACGCCAAACTCTGCTTGGTTTGATGTACAGCACAATGAATCATGGGGAAACTCAAATGTGGATATGGTCCATGCCAGGCCCCTACAAGTAGGGGGTGCAGATTATCCAGGGGATGCAACCGAGGGAAAGCTCCCTTTGTTGAAAACTAGAGAATTCAATCCCAACACCTCTTATGACAATGCGCTCAGCAACAACATGGGATTATTTCATAACCATTCCCAGATGGCTTTTTCATCTGATGTTAATATGCTCCAAGGTTACCATGCAACCAACAATTATGAGCAACCGACAAACTTCAATATGGCTATGGCTAATAGTGACAACACTGGAATTAGGATAAGGTCTCGGCCACCAGGTTATGAAGGGCCAAACGTAAACTCCAATATGCAACCACAAGGTACTGCACCTAGGAGAATACGGTTGGCACGATCTCTTGCACCTCAACACATGTCCAATGAGGCGGCAAAAGATTCGAGTTACGAGTCAAAAGATCAAAATTCACAACTAACCACTGCCAGGGAGATGGAAACTTCCAAAGACCTTGCTGCTGGTGAGAGTGTTACTGTTACTAGTGATGTGGAGGAACAGGAGACATCACCAGTTGAAAATAAGGAATTCGAAGACTTCAACACAGTCCAGCAGAGCACATCATCAGCTTCCTCCAATCTTTCCACGTGCTCTTCTGATTCTGAAGTTTCTTATGAGGCAGAAAAAGAATCTGGTTGGACATCAGAAGACCATAGTCCAAAACCAGCTGCCGCGGGGGCCAGTAAAGCTTCCGAAGACCAAGTTCCCAGCGAGTGCGTCAATGATATCACTGATGATGTGGATGAACCCAGGATACCAAACGCTTATACTCTAGAGGTCTCAAAGGAGGAATCCTTCTCGGACTCTCAGTCGAAAGACTCTCTATTGCGTAGAAAGGTGTGTTACCCATCGAAGTCTTCCTCAAATCTAGCCAAGTGGTATTCGGTTATTGCAGTCTCAGCCACTTTGGTGGTGTTACTAGCATTCCTTGTTAATACATGGGGTTATGGATATTACCTTAAAGTTTAA 2097 0.454 MGAVEVFQQQPLVVDAAPVLSLNSLPLGFRFRPTDEELVDFYLRQKINGNGDEVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSTVIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLQELDGTNPGQNPYVLCRLFKKQDESLEGSNGEEMERTTSTNLTANYSPEEIQSDPAVKSVSSSQATEDDKKLAVIPLTPEEAISNVITPVGCQNDGCDAYDAQNQIAAGDPSKEEDLQVNMDIFYDPSELFDDKLFSPLHKHIPEELFHQSNNEANGHFGLQHQCGTNEISISDFFDSVINWDEISGDNSSGQTPNSAWFDVQHNESWGNSNVDMVHARPLQVGGADYPGDATEGKLPLLKTREFNPNTSYDNALSNNMGLFHNHSQMAFSSDVNMLQGYHATNNYEQPTNFNMAMANSDNTGIRIRSRPPGYEGPNVNSNMQPQGTAPRRIRLARSLAPQHMSNEAAKDSSYESKDQNSQLTTAREMETSKDLAAGESVTVTSDVEEQETSPVENKEFEDFNTVQQSTSSASSNLSTCSSDSEVSYEAEKESGWTSEDHSPKPAAAGASKASEDQVPSECVNDITDDVDEPRIPNAYTLEVSKEESFSDSQSKDSLLRRKVCYPSKSSSNLAKWYSVIAVSATLVVLLAFLVNTWGYGYYLKV* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1564 698 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
Ahy17g1564 698 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 573 - -
Ahy17g1564 698 MobiDBLite consensus disorder prediction 552 578 - -
Ahy17g1564 698 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 573 - -
Ahy17g1564 698 MobiDBLite consensus disorder prediction 497 626 - -
Ahy17g1564 698 MobiDBLite consensus disorder prediction 498 522 - -
Ahy17g1564 698 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Ahy17g1564 698 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Ahy17g1564 698 SUPERFAMILY NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1564 Ahy-Chr17 31791365 31795429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1564 19 488 NAC Transcription Factor Family AT4G35580 41.300 2.47e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy17g1564 NAM 4.20E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1564 - - aip:107609038 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1564 17 31791365 31795429 Ahy17g1564 17 31791365 31795429 PCT