Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1550 ATGGGTGAAGAAGCAAAACAGGAACAAGCTAAGGCAGAGGCAGAGGCAGAGGTTAAAGCAGAGGAGAAGAAAGAAGAAGAAAAACCAAAAGAAGAAGAGAAGAAGAAAGAAGAGGAAAAGGGAGAAGCAGGAGCAGAGGTAGAAGAGAAGAAGAAGGAAGAAGAAAAAGAAGAAGAAGCACCACCTAAACCACCAGCACCATGTGTGCTTTTTGTGGACCTGCATTGTGTTGGATGTGCCAAGAAAATTCACAGATATATCATGAAAATTAGAGGAGTTGAAGAAGTGGTAATTGACATGGCTAAAAATGAAGTGACAATAAAGGGAATAGTGGAGCCTCAAGCAATATGTAACATTATTACAAAGAAAACAAAAAGAAGGGCCACTGTTATTTCTCCTTTGCCTGCAGCAGAAGGAGAACCTATACCTGAAGTTGTTAATTCTCAGGTTAGTGGGCCAGTAACTGTGGAACTTAATGTAAACATGCATTGTGAGGCTTGTGCTGAGCAACTCAAGAAGAAGATACTCCAAATGAGAGGGGTTCAAACCGCGGTAACTGAATTTAATAGCGGAAAAGTTGTTGTTACCGGAACAATGGACGCAAACAAGCTAGTAGACTACGTTTATAGACGCACCAAAAAGCAAGCCAAAATAGTTCCACCGCCAGAGCCGGAGCCGGAGCCGGAACCTGAAAAGAAAGAAGAGAACAAAGAAGCCGCCGAAGACGGAAAGAAGGAAGAGGAGAAGAAAGAAGAGGAGAAAGCACAAGAAGAAGAGAAGAAAGAAGAGGGTGGTGAGAACAAAGAAGAAAAGGGTGGCGAAGAAGGGAAGAAAGAAGAGAATAACAATATGCAAGTGGTTTATAACTATAGCATGGAAGAGGATTTGGGAATGAAGAGAATGATGTACTATTATCAATATCCACCACTCTATGTCATTGAACGACTTCCACCCCCTCAACTCTTCAGTGATGAAAATCCTAATGCATGCTGCATTTCATAA 1002 0.4172 MGEEAKQEQAKAEAEAEVKAEEKKEEEKPKEEEKKKEEEKGEAGAEVEEKKKEEEKEEEAPPKPPAPCVLFVDLHCVGCAKKIHRYIMKIRGVEEVVIDMAKNEVTIKGIVEPQAICNIITKKTKRRATVISPLPAAEGEPIPEVVNSQVSGPVTVELNVNMHCEACAEQLKKKILQMRGVQTAVTEFNSGKVVVTGTMDANKLVDYVYRRTKKQAKIVPPPEPEPEPEPEKKEENKEAAEDGKKEEEKKEEEKAQEEEKKEEGGENKEEKGGEEGKKEENNNMQVVYNYSMEEDLGMKRMMYYYQYPPLYVIERLPPPQLFSDENPNACCIS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1550 333 SUPERFAMILY HMA, heavy metal-associated domain 150 214 IPR036163 GO:0046872
Ahy17g1550 333 MobiDBLite consensus disorder prediction 1 62 - -
Ahy17g1550 333 CDD HMA 157 197 IPR006121 GO:0046872
Ahy17g1550 333 ProSiteProfiles Heavy-metal-associated domain profile. 161 195 IPR006121 GO:0046872
Ahy17g1550 333 Coils Coil 2 53 - -
Ahy17g1550 333 MobiDBLite consensus disorder prediction 215 281 - -
Ahy17g1550 333 Gene3D - 152 218 - -
Ahy17g1550 333 Pfam Heavy-metal-associated domain 159 205 IPR006121 GO:0046872
Ahy17g1550 333 Pfam Heavy-metal-associated domain 70 116 IPR006121 GO:0046872
Ahy17g1550 333 Gene3D - 67 129 - -
Ahy17g1550 333 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 31 333 IPR044258 GO:0046872
Ahy17g1550 333 MobiDBLite consensus disorder prediction 1 64 - -
Ahy17g1550 333 SUPERFAMILY HMA, heavy metal-associated domain 69 123 IPR036163 GO:0046872
Ahy17g1550 333 CDD HMA 74 129 IPR006121 GO:0046872
Ahy17g1550 333 ProSiteProfiles Heavy-metal-associated domain profile. 74 122 IPR006121 GO:0046872
Ahy17g1550 333 MobiDBLite consensus disorder prediction 215 282 - -
Ahy17g1550 333 Coils Coil 233 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1550 Ahy-Chr17 31580500 31583608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1550 - - mnt:21386171 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1550 17 31580500 31583608 Ahy7g1325 7 28194290 28199028 hybridization
Ahy17g1550 17 31580500 31583608 Ahy17g1550 17 31580500 31583608 PCT