Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1540 ATGAAGAAATCACCTTCAAGCAGCATCAATAAAAGTTTGCATAATCAATATAGCCAAAGAAAAGAGAATGATCGTTCTTTCTTGAAATCTTTCAAGTCTGCTTTCAGAGCTGTTTTTGCATTGTTCCTCTCCGGAAGCAAAAGAAAGACACCCTCAAAAGTTGATGAAAGAAACAACATATCAAAAGTCAGAGGAGTATCATCTTCAATTGACTCATCCAAAAGTTCATCAAAATGGAAATTTTCTAACTCCTATGCATCATCATCTAGAACTGCAAGTGGGCAACTTGAGATTGGAAACTTCACCTTTGAAGAAATCTACAAGTCAACGTCAAGATTCTCCCCGGAGAATCAGATAGGAGAAGGTGGATTTGGAACAGTTTACAAAGGTAAGCTTAACGACGGAACTCTTGTTGCCGTGAAGCGCGCCAAGAAGGACGGACCGAAACACTTGTACGAGTTCAAGAATGAAATATACACCTTGTCAAAGATTGAGCATCGGAATCTTGTGCGGCTATATGGATATTTGGAGCTTGCAGAAGAGAAGATTATTGTTGTTGAGTATGTTGGTAATGGGACCCTTCGCGATCATCTAGATGGTACTCAAGGGGATGGACTAGAAATTGCTGAGCGTCTAGACGTAGCAATTGATGTGGCTCACGCAATCACTTACCTTCACATGTACACAGAGAACTTAAGGGCCAAAGTGGCAGACTTTGGTTTTGCACGCTTGTCTGATGACCCTTCAGCAACTCATATTTCAACTCAAGTTAAAGGAACTGCTGGCTACATGGATCCTGAGTACCTAAGAACATACCAACTCACTGATAAGAGTGACGTTTATTCGTTCGGTGTTTTGCTTGTCGAAATGATGACAGGACGGCATCCCATCGAGCCCAACAGACCCCTCCAAGAGAGAGTTACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTGTTTGCAATGGACCCGAGAATGCGAAGAAGCCCGGCCTCTAACAAGGCAGTGAAGAAGGTTCTAAAACTAGCCTTCCAATGCCTTGCACCTTCGCGGGAATTGCGGCCATCAATGAAGAGTTGTGCAGAGGTTCTATGGGGAATCAGGAAAAGCTTTAGAGATGAAGCCACTTCTAATGTTCCTCCTCTTCCTTCTCACCAATCTGAAAATTTTCCTCAAAGAGGAAAGAATTTGCAAACGGTATTTGGTATTGAGGATGATGAGAGCAATAAATTTGCTTCTGCACCTAACCAAATTCATTCATAA 1272 0.423 MKKSPSSSINKSLHNQYSQRKENDRSFLKSFKSAFRAVFALFLSGSKRKTPSKVDERNNISKVRGVSSSIDSSKSSSKWKFSNSYASSSRTASGQLEIGNFTFEEIYKSTSRFSPENQIGEGGFGTVYKGKLNDGTLVAVKRAKKDGPKHLYEFKNEIYTLSKIEHRNLVRLYGYLELAEEKIIVVEYVGNGTLRDHLDGTQGDGLEIAERLDVAIDVAHAITYLHMYTENLRAKVADFGFARLSDDPSATHISTQVKGTAGYMDPEYLRTYQLTDKSDVYSFGVLLVEMMTGRHPIEPNRPLQERVTIRWAMKMLKQGDAVFAMDPRMRRSPASNKAVKKVLKLAFQCLAPSRELRPSMKSCAEVLWGIRKSFRDEATSNVPPLPSHQSENFPQRGKNLQTVFGIEDDESNKFASAPNQIHS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1540 423 SUPERFAMILY Protein kinase-like (PK-like) 89 370 IPR011009 -
Ahy17g1540 423 Gene3D Transferase(Phosphotransferase) domain 1 189 384 - -
Ahy17g1540 423 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 14 394 - -
Ahy17g1540 423 PANTHER RECEPTOR-LIKE PROTEIN 55 14 394 - -
Ahy17g1540 423 MobiDBLite consensus disorder prediction 1 23 - -
Ahy17g1540 423 Gene3D Phosphorylase Kinase; domain 1 72 188 - -
Ahy17g1540 423 ProSiteProfiles Protein kinase domain profile. 113 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1540 423 ProSitePatterns Protein kinases ATP-binding region signature. 119 145 IPR017441 GO:0005524
Ahy17g1540 423 MobiDBLite consensus disorder prediction 1 16 - -
Ahy17g1540 423 Pfam Protein tyrosine and serine/threonine kinase 116 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1540 Ahy-Chr17 31269320 31273215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1540 68 367 Trihelix Transcription Factor Family AT1G70460 38.941 1.21e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Ahy17g1540 PK_Tyr_Ser-Thr 4.40E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1540 - - gmx:100811511 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1540 17 31269320 31273215 Ahy17g1540 17 31269320 31273215 ECH
Ahy17g1540 17 31269320 31273215 Ahy7g1280 7 25519405 25523092 hybridization