Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1526 ATGAAACCCACTAAAGAAGTAGCTTCTACTGCTGCAAATCTCAACATGTTGAACCATCAACAATTATTCTTGAGCGGTATGCCTCAACAACAACAACAACCGCCAGTACCACAAATTCCAGTGCAATTCCATCAACAAAGAAACATTCTTCCAATCTATCAATCCGGAGTTTGTGCAAAGAAGATGCAACAATTTGTCCATTGCCAGCAGCGCCGGACGGCCGACAACAACATTATCTTCTGGAAGAGATTTGTGGCCGAGCTTTTCGCTCCGAATGGTAAGAAGAGCTTCTGTTTCTCCTTGTATCCAAGACCAAAAACCAGAGCCAATTTGTCCCTTGGTAGTATGAAAAAATGTGATATATGCAAAAAGAATCCTGTTAATGGCTATGAAGCGTGTTTTGATGTTCTTCCAAGGCTTTTAAAGGTGAAATATGAAAGTGGACTATTGGAAGAGAGACTTTTTACCGACATTCCCAGCGAATTCAGAGACCCTTCTGGCTACATTGTTCTGGTATGTAAGAAAGCAAGAAGAGAAAGCTTGTTCGACAAGTTTCGAGTCGTCCACAAAGGTTCCATTCGAATAGTTTTCTCCCCTTACATCAAGATATGTTCTTGGGAATTCTGCGTGACGCACCACGAAGTGTTCATTAGCAGAAGCCATTTGGTTCCTAATGTGAATCAAATTGGTGATGCCATATCAAAGTTCCAGAATTTCGCAGCCAATAATAATGTTACTGCTGAGGAGTTTCAAGAAAGTAGCAATAAGTTGGTTGCAGTAACACAAGAATTGGCTAAGAAATTGGAAGTTCCAATGCTTGATGATTATTCGGGGTTTGCTAAGAGCTATGTTAGGTGCCTTCAATTAGCAGAAGTTGGGAACTTGATGAAAGGCGTGATTGATTTCAGCATACGGAATAAGATTGGACCTATCGAGAGCTTGGAAAAATTTCCCAAGAAACCTAGAATTGGTGATCATGGTGAAGATCAATTGCAGCAACAACAGCAGCATCAAAACGGGAATCATGATTTGAATAATGGTGGTAGGAACAATGGACACACACCTGGTATTCAAATTGGTTCTTCTAGGAATGGTACCTTAGCCACGTCAAGCACTGTTCAGATTCATAATTCAGTTGATTCTAGGGTTCAAAATTCAGTGAATGGTGAAGAAAATGCTCAGATTCAGCCCCCTAATTCCCTCCCATAA 1209 0.4078 MKPTKEVASTAANLNMLNHQQLFLSGMPQQQQQPPVPQIPVQFHQQRNILPIYQSGVCAKKMQQFVHCQQRRTADNNIIFWKRFVAELFAPNGKKSFCFSLYPRPKTRANLSLGSMKKCDICKKNPVNGYEACFDVLPRLLKVKYESGLLEERLFTDIPSEFRDPSGYIVLVCKKARRESLFDKFRVVHKGSIRIVFSPYIKICSWEFCVTHHEVFISRSHLVPNVNQIGDAISKFQNFAANNNVTAEEFQESSNKLVAVTQELAKKLEVPMLDDYSGFAKSYVRCLQLAEVGNLMKGVIDFSIRNKIGPIESLEKFPKKPRIGDHGEDQLQQQQQHQNGNHDLNNGGRNNGHTPGIQIGSSRNGTLATSSTVQIHNSVDSRVQNSVNGEENAQIQPPNSLP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1526 402 Pfam LIM-domain binding protein 63 315 IPR029005 -
Ahy17g1526 402 PANTHER LIM DOMAIN-BINDING PROTEIN 10 398 IPR029005 -
Ahy17g1526 402 PANTHER TRANSCRIPTIONAL COREPRESSOR SEUSS-LIKE ISOFORM X1 10 398 - -
Ahy17g1526 402 MobiDBLite consensus disorder prediction 317 402 - -
Ahy17g1526 402 MobiDBLite consensus disorder prediction 328 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1526 Ahy-Chr17 30594783 30595991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1526 51 320 C2H2 Transcription Factor Family AT1G43850 48.162 4.05e-81 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1526 - - adu:107458399 731.865