Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1525 ATGACAATGTTGGATACTGAGAAAAGTCGTAGGGTAGCAGATGATGCAAAAGATCAAGGATCTAGTCTGGCGAATGTGAGGTCAATTGAAGAACCAAATAGTTCCAATCGCTGCGAGGCAGGGGTAACAGCAGAAGATTTGGCTATTGCTGAGTTCGATTCAGTTGAGGAGGCATATGCAAGGTATGTGGAACATGCACGGGTTACCGAGTTTGCGGTTCGAAAGGGAGATTCGGGAAGAGATAATGAAGGTAATGTTGTGAGAAAATTTTTCTTCTGCAATAGAGAAGGATTGTGGGGTAAGAAACATTACGAGAGGATTGATAGACAGCGGGCACACAAACCAATTACAAGAACCAATTGTAATGCTAGGATTGTGGTTCATCTAGACAAGGGTTGTGGAAAGTGGAAGATGAAATCTTTCGTTGCGGATCATAACCATGAACTAGCCCCAGCAGACCACACAAATATAATGGCACCGCATCGGCACATGTCGGAAGGCGACAAGGCCCATGTTCATAGCTTGCACGAAGCAGGTTTCCAGACAACCCAAATCATGAGATTCTTTGCCTATCTCGCAGGTGGTTATCACAATTTACATTTTACAAAGAAGGATCTATATAACTATATCGATGATGTTCGATGTTCCCGCATAGTGGAGGGTGATGCTGTTGCGGCCATTAGCTATCTTAAAGGGAAGACCGAACTTGATCCCCTAGCTGTGGTACAATACTCGTACTGTGCTGAAAACCATTTGGGTAATCTATTTTGGTGTGATGGTCAAATGCAGCATGACTATGATTGTTTTGGTGATGTCTTGGCCTTTGACTCAACCTATAGAAAGAATTTATACAATAGGCCTTTGGTGATTTTTTCAGGTACTAACCATCATAGAAAAACTATTATATTTGGGTTTGGGTTGCTTGAGGATGAGAAGATTCCTTATAAATGGTTGCTAAGGAGTTTTTTTTGGATGTAA 978 0.4192 MTMLDTEKSRRVADDAKDQGSSLANVRSIEEPNSSNRCEAGVTAEDLAIAEFDSVEEAYARYVEHARVTEFAVRKGDSGRDNEGNVVRKFFFCNREGLWGKKHYERIDRQRAHKPITRTNCNARIVVHLDKGCGKWKMKSFVADHNHELAPADHTNIMAPHRHMSEGDKAHVHSLHEAGFQTTQIMRFFAYLAGGYHNLHFTKKDLYNYIDDVRCSRIVEGDAVAAISYLKGKTELDPLAVVQYSYCAENHLGNLFWCDGQMQHDYDCFGDVLAFDSTYRKNLYNRPLVIFSGTNHHRKTIIFGFGLLEDEKIPYKWLLRSFFWM* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1525 325 Pfam MULE transposase domain 272 320 IPR018289 -
Ahy17g1525 325 PANTHER OS02G0262500 PROTEIN 47 322 - -
Ahy17g1525 325 MobiDBLite consensus disorder prediction 1 38 - -
Ahy17g1525 325 Pfam FAR1 DNA-binding domain 62 150 IPR004330 -
Ahy17g1525 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 322 IPR031052 GO:0006355
Ahy17g1525 325 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1525 Ahy-Chr17 30573806 30574783 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1525 FAR1 5.60E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1525 - - ahf:112763080 683.715