Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1478 ATGGCTTCTTCAACTTCAACGTGGGTTAGAGGCAAGTGCGTTGGAAGGGGCGCCTTTGGCACCGTTAACGTGGCGGTTACAAAATCAGACGGTTACGTTTTTGCAGTTAAGTCCGTCGATCTTATAACGGCTCCGACGGCTCAGATTGAAGCTTTGGAGAACGAGATTAGGATCTTGAGGCTCCTACCTCCCAGTCCTCACGTGATCACTTTCCTCGGCGATGATGTCACGTGCGAGAGGACCAACGGGGCTTCCACGTTCAGAAACCTGCACTTGGAGTACATGCCACGTGGCACCGTCGCTGATTTGGACCCTGCTGACGTGGACGAACGGTTGGTTCGCCGTTACGCTTCCTGCTTGGTTCACGCGCTGCGCCACCTCCACGCTCTTGGCGTTGTTCACTGCGACGTTAAGGGAAGGAACGTGCTAGTTTCCGACGACGGCGGAGCGGTGAAGCTCGCGGATTTTGGATCCGCTGCGGAATATTCCGGCGAGAGTTGCGTTGGTTCGAGGGGGAGTCCGATGTGGATGGCGCCGGAGGTTGTTCGCCGGGAGTACCAGGGGCCGGAGTCTGACGTGTGGTCGTTGGGTTGCACGGTGATTGAGATGGTCACCGGAAAGCCACCGTGGGAGGATCGCGGCGCTGACACGCTGAGTCGGATCGGGTATTCTAGCGAGTTGCCTGAGTTTCCGACTCGGTTATCGGAACTCGGTCGGGACTTCCTAGAGAAGTGTCTGAGAAGGGAGAAGAGTGAGAGGTGGAGCTGCGATCAGCTTCTGCAGCATCCATTTTTGGTCGGTGAGGGTTCCATTAAGGTTTTGGAATCGTCGCCTCGGTGCGTTTTGGACTGGGTGGACTCGGGGTTCGACTCGGACGAAGAAGAAGGAGAGATGAACTGGGAAGGTGAGTGTGTGAGTTCGGCGAAGGGTAGAATTTGTAAATTGGCTACGGGGATAGGGGCAAACTGGGAAACACAGGGATGGATAGTGGTGAGAGCATTGGCATCTGAGTCTGACGAAGAAGCAACGATAATAACAGAAGCAACAGGAAACGGAGAAGAAGGGGTAGTTTCGGAATTCGGAAATGATGTGGCGAGGGTAGAATCGGGAATTGAGGTTGGGGCATGTGGGGAATATTCGGATTTTTGTGGAAGGACAGGAGAGAAAGTTGGAAGGGTAAAATGGGAAAGGCGAAAGAACAAAAGGTTGGTGTGGCGGCGGTGGAAGCTCCACCGGCAGGGTGGTGGTTGTGGCAATAAGTGGGAAAATGAGTTGGATAAGAATGGGATTAAAGGAATATTCACAATTTACAGCTTGCATTGTAAAATATTTAATTTGTATTATTATCTAATTTTCTCAGTATTTATTATCAATAAATTATGTCTTTCGAGCACACTTAATTGTTTTACTGTATGCGACATGGAAAATTCGTTAAATATAAGAAAAAATTAA 1452 0.5069 MASSTSTWVRGKCVGRGAFGTVNVAVTKSDGYVFAVKSVDLITAPTAQIEALENEIRILRLLPPSPHVITFLGDDVTCERTNGASTFRNLHLEYMPRGTVADLDPADVDERLVRRYASCLVHALRHLHALGVVHCDVKGRNVLVSDDGGAVKLADFGSAAEYSGESCVGSRGSPMWMAPEVVRREYQGPESDVWSLGCTVIEMVTGKPPWEDRGADTLSRIGYSSELPEFPTRLSELGRDFLEKCLRREKSERWSCDQLLQHPFLVGEGSIKVLESSPRCVLDWVDSGFDSDEEEGEMNWEGECVSSAKGRICKLATGIGANWETQGWIVVRALASESDEEATIITEATGNGEEGVVSEFGNDVARVESGIEVGACGEYSDFCGRTGEKVGRVKWERRKNKRLVWRRWKLHRQGGGCGNKWENELDKNGIKGIFTIYSLHCKIFNLYYYLIFSVFIINKLCLSSTLNCFTVCDMENSLNIRKN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1478 483 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1478 483 SMART serkin_6 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1478 483 Gene3D Transferase(Phosphotransferase) domain 1 3 300 - -
Ahy17g1478 483 CDD STKc_MAPKKK 8 265 - -
Ahy17g1478 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Ahy17g1478 483 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Ahy17g1478 483 ProSiteProfiles Protein kinase domain profile. 8 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1478 483 SUPERFAMILY Protein kinase-like (PK-like) 6 278 IPR011009 -
Ahy17g1478 483 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 358 - -
Ahy17g1478 483 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1478 Ahy-Chr17 27547980 27549720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1478 1 373 MAP Kinase Kinase Kinase AT1G07150 56.316 1.81e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy17g1478 Pkinase 1.10E-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1478 - - mtr:MTR_5g071560 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1478 17 27547980 27549720 Ahy17g1478 17 27547980 27549720 ECH
Ahy17g1478 17 27547980 27549720 Ahy7g1217 7 21919047 21920583 hybridization
Ahy17g1478 17 27547980 27549720 Ahy17g1478 17 27547980 27549720 PCT
Ahy17g1478 17 27547980 27549720 Ahy7g1217 7 21919047 21920583 PCT
Ahy7g1217 7 21919047 21920583 Ahy17g1478 17 27547980 27549720 PCT