Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1457 ATGACACGTGCAATCCGCAGTGGCACCACCGCTACCAGTTGTTGCTATGTGCCGTCGTTTCAACCCTCTTCCTCTTTTAATATGTTTGGTTTCGATTTGCCTTGTGGCCCTGGTGGTTCTTTCACATTTGGCAAATCAATTTGGGTTTCTGATTCTGTTAGCTTACCAGAAGACCAGGGTGCTTTGGATTTGGTCAGGACAGCATTTGGTAAATCTAATGGAAAAGAGGAACCCCTGAATCATGTTGAAGCAGAGAGACAAAGGAGGAAAAAGCTTAACCAATGGTTCTACGCCTTGAGAGCTGTTGTTCCGAATATATCTAAAATGGACAGGGCATCTCTACTTGGCGATGAACAACCCGTTGTTGCTAAGGGTGTGGAAGAAGAAAAAGAAGATGAACAGCTGTCGGTTTTTTCGTCGGCTATTATTGATGAATTTACCATCAGTTTTTGCAATGATTAG 462 0.4329 MTRAIRSGTTATSCCYVPSFQPSSSFNMFGFDLPCGPGGSFTFGKSIWVSDSVSLPEDQGALDLVRTAFGKSNGKEEPLNHVEAERQRRKKLNQWFYALRAVVPNISKMDRASLLGDEQPVVAKGVEEEKEDEQLSVFSSAIIDEFTISFCND* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1457 153 Gene3D - 70 119 IPR036638 GO:0046983
Ahy17g1457 153 SMART finulus 82 131 IPR011598 GO:0046983
Ahy17g1457 153 Pfam Helix-loop-helix DNA-binding domain 80 114 IPR011598 GO:0046983
Ahy17g1457 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 116 IPR036638 GO:0046983
Ahy17g1457 153 PANTHER TRANSCRIPTION FACTOR BHLH3 72 117 - -
Ahy17g1457 153 PANTHER MYC 72 117 IPR045084 GO:0003700|GO:0006355
Ahy17g1457 153 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 125 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1457 Ahy-Chr17 26916377 26917689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1457 72 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 68.182 3.14e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy17g1457 HLH 9.20E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1457 - K13422 ahf:112763052 311.997