Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1449 ATGGCGAGTGTTGTGACATCATTACATTGGGGCCTGCCTCTAACTGTAAACCCTCTTCGTATTCACATAACAAACATGGAAGCAGCTCTGTCTACTAGCACAACAATGTCCCCTTCTACCACCAATGGTGGAACCTCATCTTTTGCCAAAACCTGTTTCCATGGGGTTAATGGCATTTCAGGAATTGGTATAGTGTCTATACCATTTGCATTAGCCTCAGGAGGTTGGTTAAGCATAGTTTTTCTGTTCATGATATCCATAGCAGCATGCTACACAGGCTTATTAATCAAAAGATGCATGGACAAAGATTCCACTATTGAATCTCTTCCAGATATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTTGTAAACATTGCAATGAATTGTGAACTTTATTTGGTCATAACAGGGTACTTGATTCTTGAAGGAGATAACTTGAACAAATTAATATCTCATTTTCATGTGGATATTGGAGGATTGAGAATTACTGGAACACAATTCTTTGTTCTACTTTCAGCACTGATTATTCTCCCAACGGTATGGTTAGAAGATCTAGGTAAACTTCTATCATATGTGTCAGCAACTGGGGCCTTAGCATCAATTATATTTCTATGTTCGTTGTTGTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGAGTACTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTTAGCTTGTATGCATTTTGTTACAGTTCTCACCCTGTCTTTCCAAGTCTCTACACTTCCATGAAGAACAAGCATCAATTTTCTAATGTTTTGCTGGTGTGCTTCACATTGTGCACTTTAGTATATGCAGCAACAGCAGTTTTGGGATACTTAATGTTTGGATCAGAGGTTGAATCAGAAATAACTCTGAACCTTCCAAAAGAAAAGCTCAGTTCAAAAGTGGCAATATACACAACTTTGGTTAACCCCATAACCAAATATGCTCTGATGCTAAGGCCAATTGTGGATGCCGTAAAAAGCGTGCTTCCAAATCACTACAACAAAAGGCACAAGCTCACACATGTTGTTGTTAGTAGCATCCTTCTCATTTCTACTGTGGTTGTTGCACTCACTGTTCCATTTTTTGGATACCTTATGTCTCTCGTGGGTGCATTACTAAGTGTCTCGGCTTCATTCCTAGTGCCAAGTGTTTGTTACTTGAAGATTTCTGGAACATACAAGAAGTTAGGGTGTGAAATGATCATCAACTACTCTATTTTCTTTGTAGGTACTGCAATTGCTGCCTTTGGAACTTACACTTCACTCCTACAAATAATTAAGCATTTAAAGTTGTAA 1320 0.3864 MASVVTSLHWGLPLTVNPLRIHITNMEAALSTSTTMSPSTTNGGTSSFAKTCFHGVNGISGIGIVSIPFALASGGWLSIVFLFMISIAACYTGLLIKRCMDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDIGGLRITGTQFFVLLSALIILPTVWLEDLGKLLSYVSATGALASIIFLCSLLWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFTLCTLVYAATAVLGYLMFGSEVESEITLNLPKEKLSSKVAIYTTLVNPITKYALMLRPIVDAVKSVLPNHYNKRHKLTHVVVSSILLISTVVVALTVPFFGYLMSLVGALLSVSASFLVPSVCYLKISGTYKKLGCEMIINYSIFFVGTAIAAFGTYTSLLQIIKHLKL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1449 439 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 13 435 - -
Ahy17g1449 439 PANTHER OS05G0424000 PROTEIN-RELATED 13 435 - -
Ahy17g1449 439 Pfam Transmembrane amino acid transporter protein 45 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1449 Ahy-Chr17 26694769 26698731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1449 42 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.962 5.56e-155 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1449 K15015 - gmx:100784690 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1449 17 26694769 26698731 Ahy7g1197 7 21363339 21409764 hybridization