LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy17g1448	ATGGAGAGTCTCTCAACCACAACGTCCCCTTCTAGCAACAATAATGGTGGAGGAACCACATCATTTGCCAAGACCTGTTTTCACGGGGTTAATGGAATTTCGGGAATTGGTATAGTGTCTATACCATTTGCATTAGCCTCAGGAGGTTGGTTAAGCATAATTTTTTTGTTCATGATATCCATAGCAGCATGCTACACAGGCTTACTAATCAAAAGATGCATGGACAAAGATTCCACTATTGAATCTCTTCCTGACATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTTGTAAACATTGCAATGAATTGTGAACTTTATTTGGTCATAACAGGGTACTTGATTCTTGAAGGAGATAACTTGAACAAATTAATATCTCATTTTCATGTGGATATTGGAGGATTGAAAATTACTGGAACACATTGTTTTGTTCTAATTTCAGCACTGATTATTCTCCCAACGGTATGGTTGGAAGATCTAAGCAAGCTTCTATCATATGTGTCAGCAACTGGGGCCTTAGCATCAATTATATTTCTATGTTCATTGTTGTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGAGTACTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTTAGCTTGTATGCATTTTGCTACAGTTCTCATCCTGTGTTTCCAAGTCTCTACACTTCCATGAAGAACAAGCATCAGTTCTCTAATGTGTTGCTGGTGTGCTTCACATTGTGCACTCTAGTATATGCAGCAACAGCAGTTTTGGGATACTTAATGTTTGGATCAGAGGTTGAATCAGAAATAACTCTGAACCTTCCAAAAGAAAAACTGAGTTCAAAAGTGGCGATATACACAACTTTGGTTAACCCCATAACCAAATATGCTCTGATGCTAAGGCCAATTGTGGATGCCACAAAAAACGTGCTTCCATCACACTACAACAAAAGGCCAAAGCTCACACATATACTAATTAGTAGCATATTGCTCTTCACCACTGTTGTTGTTGCACTCACTGTTCCATTTTTTGGGTACCTAATGTCCCTTGTTGGTGCATTGTTAAGTGTCTCTGCTTCATTCCTAGTGCCATGTGTTTGCTACTTGAAGATTTCTGGAACTTATGGGAAATTGGGATGTGAAATGATCGTCAATTATTCCATAGTGTTAGTAGGAGTTGCAATTGCAGCATTTGGAACTTACACTTCCCTCTTAGAAATAATTAGGCATTTATAG	1236	0.3859	MESLSTTTSPSSNNNGGGTTSFAKTCFHGVNGISGIGIVSIPFALASGGWLSIIFLFMISIAACYTGLLIKRCMDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDIGGLKITGTHCFVLISALIILPTVWLEDLSKLLSYVSATGALASIIFLCSLLWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFTLCTLVYAATAVLGYLMFGSEVESEITLNLPKEKLSSKVAIYTTLVNPITKYALMLRPIVDATKNVLPSHYNKRPKLTHILISSILLFTTVVVALTVPFFGYLMSLVGALLSVSASFLVPCVCYLKISGTYGKLGCEMIVNYSIVLVGVAIAAFGTYTSLLEIIRHL*	412

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy17g1448	411	PANTHER	OS05G0424000 PROTEIN-RELATED	13	409	-	-
	Ahy17g1448	411	Pfam	Transmembrane amino acid transporter protein	19	403	IPR013057	-
	Ahy17g1448	411	PANTHER	TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN	13	409	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy17g1448	Ahy-Chr17	26638010	26641595	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy17g1448	18	408	Amino Acid or Auxin Permease AAAP Family	AT3G28960	55.243	1.59e-156	446

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy17g1448	K15015		-	gmx:100784690	518.85

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