Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1428 ATGAGATACACTTCACTGCTTAGAAGTCCAAAGAAAGAGGAAGAACAAGAAGTGCCAGAAGCTACTTTCTCCTCCTCCATATTACCCTTTTCCAATAACCACCAACTACTATACCATGATAATGATGATGAAGAATTCAGTATCTTGGAGCAACTTGAAGGAGTCTTGGACGTTGAAGAAGAAGAAGAAGAAGAACAAAAGTTGTTACCATCTCCACAGCAGGGAATGGTAACTAGTTGTAGTGGCGATGATGAAGAGCTTCGTTGGGATTTCATGGAATGGGAGGAGGATCATCATCGATTCCCAGAAGCAGAAAATGAATTGAAGGTAGTAAGCAATAATAACAAGTGCCTAATGGAGGAGGAGGTGAAGAAAATGGTAGTAAAGAGGGAAGAAGAAAGTAATAACAATAATGTTGGGTTTTGGGAAGTGGAAGATGAAAAGATGGTGGCTTTGAATTTGAATTTGAACTATCAAGAGGTTTTGGATGCTTGGTCTGACCGTGGCTCTCTTTGGGCTGATGACTACTCACTTTCATTGGCAACCACCAACAATGGCTACTACTATATGGGAGAAGTGCCAGTATTAGAAGAAGAAAGAACAAGAAGGGAAGCAAGTGTTCTAAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCAGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 741 0.4062 MRYTSLLRSPKKEEEQEVPEATFSSSILPFSNNHQLLYHDNDDEEFSILEQLEGVLDVEEEEEEEQKLLPSPQQGMVTSCSGDDEELRWDFMEWEEDHHRFPEAENELKVVSNNNKCLMEEEVKKMVVKREEESNNNNVGFWEVEDEKMVALNLNLNYQEVLDAWSDRGSLWADDYSLSLATTNNGYYYMGEVPVLEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1428 246 MobiDBLite consensus disorder prediction 1 19 - -
Ahy17g1428 246 Coils Coil 49 69 - -
Ahy17g1428 246 MobiDBLite consensus disorder prediction 1 25 - -
Ahy17g1428 246 Pfam CCT motif 203 245 IPR010402 GO:0005515
Ahy17g1428 246 ProSiteProfiles CCT domain profile. 203 245 IPR010402 GO:0005515
Ahy17g1428 246 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 246 - -
Ahy17g1428 246 Coils Coil 101 121 - -
Ahy17g1428 246 PANTHER CCT MOTIF FAMILY PROTEIN 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1428 Ahy-Chr17 25684426 25686191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1428 145 245 C2C2-CO-like Transcription Factor Family AT1G25440 44.915 1.17e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy17g1428 CCT 2.60E-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1428 - - aip:107608058 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1428 17 25684426 25686191 Ahy17g1428 17 25684426 25686191 ECH
Ahy17g1428 17 25684426 25686191 Ahy7g1178 7 20746830 20748744 hybridization