Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1419 ATGGCCACAGACGCAACCGCCAAATTTCAAAAGAACCCCGATTTCCGGCCGGACTTCCATCCGCCAGAGAATCTCCCCGCCGCCGTAACAACCGCTGCCGCAGCACACGACGGCCTCCACTTCTGGCAGTTCATGATCGCCGGCTCCATCGCCGGCTGCGTGGAGCACATGGCAATGTTCCCCGTTGACACCGTCAAGACCCACATGCAAGCCCTCGGCTCCTGCCCCATCAAGTCAGTCAGCGTTCGTCAGGCCCTCCGTTCAATTCTCCAATCGGAGGGTCCCTCCGCTCTCTACCGCGGCATCGCCGCCATGGGCCTTGGCGCAGGACCCGCTCACGCCGTCTATTTCTCCGTCTACGAGACCTGCAAGAAACGGTTTTCCAGTGGAAACCCTAATAACCCCATTGCTCACGCTGCTTCTGGTGTTGTCGCCACGGTGGCGAGCGACGCCGTTTTTACCCCTATGGATATGGTGAAGCAGAGGCTCCAATTGAGCAATAGTGGTTACAAGGGTGTTTGGGATTGTGTTAAGAGGGTGATGAGTGAGGAAGGGTTTGGGGCGTTTTATGCTTCATATAGGACCACGATTTTGATGAATGCACCGTACACGGCGGTGCATTTTGCAACATATGAGGCTGCGAAGCGAGGATTGATGGAGGTGTCGCCGGAGAGCGTGGATGATGAGAGGTTGGTGGTTCATGCCACAGCCGGGGCTGCTGCCGGTGCTTTGGCTTCTGCAGTCACAACGCCGCTGGATGTTGTTAAAACTCAATTGCAGTGTCAGGGTGTGTGTGGATGCGATAGGTTCACGAATGGTTCAATTCAAGATGTAATTAAAACTATAGTGAAAAAGGATGGATACAGAGGGTTGATGCGAGGATGGATTCCAAGGATGCTGTTTCATGCTCCTGCAGCTGCTATCTGCTGGTCTACATACGAAGCGGGAAAGTCCTTTTTTCAAGATTTCAATCAACCAAAGGATGTTGACACTGTCACTTAA 1002 0.5359 MATDATAKFQKNPDFRPDFHPPENLPAAVTTAAAAHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALRSILQSEGPSALYRGIAAMGLGAGPAHAVYFSVYETCKKRFSSGNPNNPIAHAASGVVATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVMSEEGFGAFYASYRTTILMNAPYTAVHFATYEAAKRGLMEVSPESVDDERLVVHATAGAAAGALASAVTTPLDVVKTQLQCQGVCGCDRFTNGSIQDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFNQPKDVDTVT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1419 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 39 126 IPR018108 -
Ahy17g1419 333 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 327 - -
Ahy17g1419 333 PRINTS Mitochondrial carrier protein signature 57 71 IPR002067 GO:0055085
Ahy17g1419 333 PRINTS Mitochondrial carrier protein signature 44 57 IPR002067 GO:0055085
Ahy17g1419 333 PRINTS Mitochondrial carrier protein signature 148 166 IPR002067 GO:0055085
Ahy17g1419 333 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Ahy17g1419 333 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Ahy17g1419 333 Pfam Mitochondrial carrier protein 39 129 IPR018108 -
Ahy17g1419 333 Pfam Mitochondrial carrier protein 230 322 IPR018108 -
Ahy17g1419 333 Pfam Mitochondrial carrier protein 134 220 IPR018108 -
Ahy17g1419 333 PANTHER MITOFERRIN-1-RELATED 1 327 - -
Ahy17g1419 333 SUPERFAMILY Mitochondrial carrier 37 314 IPR023395 -
Ahy17g1419 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 319 IPR018108 -
Ahy17g1419 333 Gene3D Mitochondrial carrier domain 136 333 IPR023395 -
Ahy17g1419 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 133 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1419 Ahy-Chr17 25576362 25579820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1419 140 330 Chloroplast and Mitochondria Gene Families AT1G07030 27.835 3.47e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1419 K15113 - gmx:100802640 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1419 17 25576362 25579820 Ahy17g1419 17 25576362 25579820 ECH
Ahy17g1419 17 25576362 25579820 Ahy7g1170 7 20619310 20622711 hybridization