Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1398 ATGCCAACCCAGAATTCCTACCATCTAAACCAGAAAAGGCTATGGAGATTTGTGGGATTTATGTCAAGTGCCAATGGATTTCTGTGTTATGCTAAGAGTTCCTCTTTCAAACATCTATTTGGGGAGTGGAACTTGTTGAAGATCATTCTTTACACCCTGTTAAGTTTCAGCATCAGCACCATCATGCTATTTCCCAAAAAATGCAGGCTTTCAAGGAGTTTCTTGCTTAAAGCTTATGTGGGTGTTCTGGTTTTGCTTCTAACCTCTCTCTACTCATTTTTCTCTGACAAATCTGACAATGGAAAACCAGACTTACTAAGCATGATTTCGAATGTTTCTTTCGCCTTGATGTCTTTGTCCCTGTCAAGGCAAATTGATCTTGGCTTTGAGGCAGAGCTTCTCAACTTCTTCCTTGGATGCCTAACTATTCAACTCATGAAGATCAGCTTGATGCTCTCCATCGTTGCAGCCATCTTTTGTTACACTCTCATGATTCTTCGTTCCAAATGGGAATCTCAATCGCATGTGAGAACACTAAGAATGCAAGACCATGTAACAGTAGATATTGACGCTGAAAATGATGACTACTTAAATGCCTTCCAATGCAGTTACGACCATGGCAAAAAACAAATGCAGGATGATGGATACAGTTGGAGAAAATATGAAGAGAATCCATTGAGAAGAAGGGGAAATCAGATAAGCTTCTACAGATGCTCACACCCGAATTGCAAGGTTAAGAAGAAAGTAGAGAGAACAATAGATGGGGAAATTATTCATGTAAACTACAAAGGTACTCATGCCCACCGTAATTGCAAGCCTAAATTTCCTATAAAGAGGAACTCATCATCTGAATCTTTTTATTCACTTCTACCTTCAGAACCTTCCCATACTAAAATTATAGATCAATCATTGGCCTTCAATGGCGATGGACAACTGGATCATGATCCGGCACCAGAGAGCTCATCATTATCAATATGA 978 0.3957 MPTQNSYHLNQKRLWRFVGFMSSANGFLCYAKSSSFKHLFGEWNLLKIILYTLLSFSISTIMLFPKKCRLSRSFLLKAYVGVLVLLLTSLYSFFSDKSDNGKPDLLSMISNVSFALMSLSLSRQIDLGFEAELLNFFLGCLTIQLMKISLMLSIVAAIFCYTLMILRSKWESQSHVRTLRMQDHVTVDIDAENDDYLNAFQCSYDHGKKQMQDDGYSWRKYEENPLRRRGNQISFYRCSHPNCKVKKKVERTIDGEIIHVNYKGTHAHRNCKPKFPIKRNSSSESFYSLLPSEPSHTKIIDQSLAFNGDGQLDHDPAPESSSLSI* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1398 325 Pfam WRKY DNA -binding domain 213 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1398 325 MobiDBLite consensus disorder prediction 306 325 - -
Ahy17g1398 325 ProSiteProfiles WRKY domain profile. 207 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1398 325 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 5 282 - -
Ahy17g1398 325 SUPERFAMILY WRKY DNA-binding domain 209 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1398 325 SMART WRKY_cls 212 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1398 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 282 IPR044810 GO:0003700
Ahy17g1398 325 Gene3D WRKY domain 200 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1398 Ahy-Chr17 24830258 24831541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1398 213 268 WRKY Transcription Factor Family AT3G01080 53.571 2.96e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g1398 WRKY 7.10E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1398 - - ccaj:109792596 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1398 17 24830258 24831541 Ahy7g1151 7 19878586 19880951 hybridization