Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1397 ATGAAGCTCATCGAAATTAGGAGATGGCTGACGCAGCCACATGTATGGAGGTTTGTTGGTTTGGGTTCATCAGTAGTCGGTTTATTCTGTTACGCAGTTAGCTCCTCCTTCAACAATCTGTTTGGAGAGTGGACCTTTCTGAAAATATTTTTTTACACTCAACTCAGTTTAATCATCTGCATTGCAATCTTTTACGCTAAAGTTTGGCAAAGTTCAAGGAGTCTCCGGTTCAAAGGTAACATGGCACTTTTAGTGTTAACCATAACCTCTGCTTACTCCTTCTTCTTGGATAGCAAAGCTGTAAAGAAGAAACCAGACGCATTTAGCTTGATATCATGTCTTGCGTTTTCTATCATGTCGCTTTGCTTGTCAAGACAGATTCCTTGCGGATTTGAAGTGGATCTGATGTATTTCTTTCTCGGAGCTTTAATAGTGCAACTCATGAAGATAAAGCTATGGTTAGGTATTCTTGGAGTAGGATTCAGCTATACCCTCAACATTCTTCGTTCTTCTTTAGATGAGAACTTGCATGAAGGAGCAGGACTCCAAGAAGATCAACGTAATGTCGTAATCCAAGTGGAAGAAGAAGAAGAAGAAGAATCCATTTCTCCTCAACCACCAAGATTCATGAGTGTTATTCAAGAATTGCATAGGGCTAATTGGGGACTTGTTGAGGTGTTATGGTGTCATTTGAAGGAATACCTTGTGGACAAAGATGATCAAATTCCGATTCCAATGACACTGGTGAATGACCATAATTTTCTTATCAATGCGCTTCCGCCGAAAGCAGTCGACGACCTCCATGAAAAGGTTAAGCTGATGATGGATTCCGGGTTCAAGAATGAATGCTCGAACCAGTATAATAGCTGGAGAAGGGAGTTCTTGGACATGTGTCTATCAATGTTGCGGTTAAAGGTTATCAACAAGATTGAAGGGGTTGACGAGAGAGAGAGGATTAGGAGCGATGTCGTAACTACCTTGCAAAAGCTCGCTAATGATTTTGTAACGGAGAGGCGTTCTTCGTTGACTCGTTTACCGAGCATGGTGAAGGTGGTTGGTACACTGCAGGATCTCATTCCAGAGCTTGATGATTCAGTGTTTTCTGCTCAACGCAGTGAAGCAGTCTCCATCATGGAGTTGGAGACATTAGAGGAAGCAACCAAGGATTATTATTGTACAAATATAGAGAATCTAATCTAA 1200 0.4133 MKLIEIRRWLTQPHVWRFVGLGSSVVGLFCYAVSSSFNNLFGEWTFLKIFFYTQLSLIICIAIFYAKVWQSSRSLRFKGNMALLVLTITSAYSFFLDSKAVKKKPDAFSLISCLAFSIMSLCLSRQIPCGFEVDLMYFFLGALIVQLMKIKLWLGILGVGFSYTLNILRSSLDENLHEGAGLQEDQRNVVIQVEEEEEEESISPQPPRFMSVIQELHRANWGLVEVLWCHLKEYLVDKDDQIPIPMTLVNDHNFLINALPPKAVDDLHEKVKLMMDSGFKNECSNQYNSWRREFLDMCLSMLRLKVINKIEGVDERERIRSDVVTTLQKLANDFVTERRSSLTRLPSMVKVVGTLQDLIPELDDSVFSAQRSEAVSIMELETLEEATKDYYCTNIENLI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1397 399 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 309 IPR004140 GO:0000145|GO:0006887
Ahy17g1397 399 SUPERFAMILY Cullin repeat-like 208 377 IPR016159 -
Ahy17g1397 399 Gene3D Exocyst complex component Exo70 209 397 - -
Ahy17g1397 399 PANTHER PROTEIN, PUTATIVE-RELATED 7 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1397 Ahy-Chr17 24827579 24829005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1397 239 399 EXO70 exocyst subunit family AT5G58430 31.776 2.83e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1397 - - ahf:112702741 750.74