Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1384 ATGAACAATTCAGTGTGGGTCGACAAAATTACCGACGTCGTTTTAACTATAAAGGATGAGTTGGACTCGGGACACGAGTTGCCAAATCATAGTGGCGTCGGTGAAGAGGAAATTCCAGTCATAGGAATGAGTTTTGGTTCGTTGCCTCTTGCACATAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATTAGGAACACAAATTTCGACAAGGCGCAGAAGGAATCAAAGATACCGGTTAATCAATCTATTTACTGCACGCGAGAAGCTTATCAAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTACAGCCACGAGATGTAGAGCAAGGATGTATGTCATACTGGACAAGGAGAAGGGAAGTTGGGTTGTGTCTAGATTAGAATTGAGGCATTCTCACCCCTGTTCGGCTAAGAAAGCTGTCCACTATCATGAGTACCGGAAGCTGACCATGCATGCTAAGTGCGTCATTACAGATAACGACGAGGCTCAAATAAGACCCAACAAGACATATCTAGCACTGGCAAACGAGGTTGGTGGGTCCTCAAACCTGGGTTTTTCAGAAAAGGATGTCAGAAATTACATCACACGCAATCTCCGATACTCCGATGACAATGAGGACTTCCAGGGAATGATGAATTATTTCGTTCGAATGAAGGAGATCAATCCCAACTTTTTTTATGCCATAGATGTTGACGATGCTAATAAATTTAGGAGCGCACTATGGGTAGATGCAAGGTGTAGGGTTTCGTATGAATATTACGAAGATGTGGTGTCGATTGACACCACTTACAGAAAACAGATCTGTATACTTATTGGTGAATTGCTTGGTCTGCCGTTTGCATCCTTTGTCGGTGTAAACTACCATGGGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGCGAGGAGATCCCTAGTTTTGAGTGGGTGTTCACACAGTGGGTGAAATGCGTCGGGACTATGCCAAGGGAGATTATCACTGACCAGTGCAAGGCGATGGCTGGTGCTATTAGGAAGGTCCTACCTGATACTGTCCACCGATGGTGCATCTGGCACATAATGAAGAAATCACAATTCAAGCTCAGTGGATACGCTAGGTACGAAGAATTGAATGCAATGATGAATCACATTGTGTGGAATTCTCCTTCAACTGAATCGTTCGAGGTTGATTGGGCTGGTTTTGTCAAACAATTTAACTTAGGCCAGAACAGATGGTTAACATTTGCCTATTTATTCACTTCATGTTATCTTTGTCGGCTTGATTCCGCTCTTATGTTTTTGCTAAGAAATGTAGCTGAGGTTTCCACCCCTATATTCGTCCATGAATACGACAATGTGCTTGGAAACAAGGAGCAAAAGGAGCTGGAAGATGATGCTGCAGACTCAAAAGGAGTCATCCCATGTATAGGGAGCACGGGCATTGAGAGACAGTTTCAGCAGGAATACACCAGTAGTATGTTCAGGACTCTTCAGCTGGAGGAGTTTATTGCTTGTGATGAGGAAGCAGCCATCTTGCAAGCTGCCCTTTGGGAAGCAAAGTCCAAGCTGACTGATTACCGTGCCAGCATGCGTTCCACTACTGTTGCTGCGACTCAGAATACCATGCCCACACAGAGCACAGGCGGTGCTATTGATGAGGTTGACCTTCAGTCAGATAATGATCATCATGGTTCTGTAAATAAAAGATTTGAGGATTCTACTATATGGAATTCATTGGATGGTGGCAGATTCATACACCTGTTGAATTCTTTTAGGCATATATAG 1788 0.4362 MNNSVWVDKITDVVLTIKDELDSGHELPNHSGVGEEEIPVIGMSFGSLPLAHKFYANYAKKVGFVTKIRNTNFDKAQKESKIPVNQSIYCTREAYQESRVNAATRANRITATRCRARMYVILDKEKGSWVVSRLELRHSHPCSAKKAVHYHEYRKLTMHAKCVITDNDEAQIRPNKTYLALANEVGGSSNLGFSEKDVRNYITRNLRYSDDNEDFQGMMNYFVRMKEINPNFFYAIDVDDANKFRSALWVDARCRVSYEYYEDVVSIDTTYRKQICILIGELLGLPFASFVGVNYHGKSTLLGCALLGSEEIPSFEWVFTQWVKCVGTMPREIITDQCKAMAGAIRKVLPDTVHRWCIWHIMKKSQFKLSGYARYEELNAMMNHIVWNSPSTESFEVDWAGFVKQFNLGQNRWLTFAYLFTSCYLCRLDSALMFLLRNVAEVSTPIFVHEYDNVLGNKEQKELEDDAADSKGVIPCIGSTGIERQFQQEYTSSMFRTLQLEEFIACDEEAAILQAALWEAKSKLTDYRASMRSTTVAATQNTMPTQSTGGAIDEVDLQSDNDHHGSVNKRFEDSTIWNSLDGGRFIHLLNSFRHI* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1384 595 PANTHER OS03G0843700 PROTEIN 30 503 - -
Ahy17g1384 595 Pfam FAR1 DNA-binding domain 53 142 IPR004330 -
Ahy17g1384 595 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 503 IPR031052 GO:0006355
Ahy17g1384 595 Pfam MULE transposase domain 264 364 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1384 Ahy-Chr17 24361639 24365390 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1384 MULE 1.80E-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1384 - - ahf:112763010 1209.9