Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1380 ATGGCATCTTCTTCTGGTACCTTAGACACTACTTCTGCTTCCAATTCTTATACCAATAACTTCACTTTCTCAACACACCCATTCATGACCACTTCTTTCTCTGAACTCTTAGCTTCTTCCGCTGAAGACAAGCCTCGTGCTTCTGCTTCTGCTGTTGGTGTTCCTAAGTTCAAGTCTACACCACCACCATCTTTGCCTCTCTCTCCACCACCCATTTCTCCTTCTTCTTACTTCGCTATTCCTCCTGGTTTGAGCCCTGCTGAACTTCTTGATTCCCCTGTTCTTCTTAATCCTTCTAACATTTTGCCATCTCCAACAACGGGGGCATTTGTTGCACATAACTACAATAATTGGAAGAACAACAACAACAATTCTGGTGGGAACCAACAACAAGTTATCATCAAAGAGGAAGAAGGAAAGAACCACAATTTCTCAAACTTCTCTTTCCAAACCCAGCCATCTATGTTTCAATCCTCATCAACTGCCACAACTAAAACACAGCAGCAGCAGCCATGGGGATTTCAAGAATCCAACAAGAAACAGGAAAATTTCTCATCATCAAACACTGTGATGAAAACTGAGAACACTTGTTCCAACCAAAACAACAATGGGTTCCAATCAGATTACAACAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCAAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAATACTAGGAGAAACTCTTCATCTTCTTCTAATTCTGCTGCGTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGACAAATGGATTCTGTTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATCAGGTGGAGATGATTATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGGGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTAGTTAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGTTGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATAACAACCTATGAAGGCAAACACAACCATGATGTCCCCGCTGCCCGCGGCAGCGGAAGCCATGCCTCTGTCAACAGACCAATGCCAAACAACCACCACAACAATGCAAGCATTGCAATTAGGCCTTTACCATCAATGACACACCACAACAACAACAACACTAACAACACTACTTCCCTTCAACAAGGGCCAGAAGGACAATCACCCTTCACACTTGAAATGCTTCAGAACCCTTCAAGCTATGGATTCTCATCTTCTGGGTTTGGGAATCCAATGGGTTCTTACATGCCTCAGCAGCAACAACAACAACAGCAATCTGACAATGTGTTTTCTTCCAGAGCCAAGGAGGAACCTAGGGATGACATGTTCCTTGAATCTCTGCTATGCTGA 1737 0.4301 MASSSGTLDTTSASNSYTNNFTFSTHPFMTTSFSELLASSAEDKPRASASAVGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNPSNILPSPTTGAFVAHNYNNWKNNNNNSGGNQQQVIIKEEEGKNHNFSNFSFQTQPSMFQSSSTATTKTQQQQPWGFQESNKKQENFSSSNTVMKTENTCSNQNNNGFQSDYNSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSVATPENSSISVGDDDFEQSSQRCKSGGDDYDDDEPDAKRWKIEGENEGISGGGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHASVNRPMPNNHHNNASIAIRPLPSMTHHNNNNTNNTTSLQQGPEGQSPFTLEMLQNPSSYGFSSSGFGNPMGSYMPQQQQQQQQSDNVFSSRAKEEPRDDMFLESLLC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1380 578 MobiDBLite consensus disorder prediction 154 230 - -
Ahy17g1380 578 ProSiteProfiles WRKY domain profile. 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 SUPERFAMILY WRKY DNA-binding domain 394 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 MobiDBLite consensus disorder prediction 276 385 - -
Ahy17g1380 578 MobiDBLite consensus disorder prediction 346 374 - -
Ahy17g1380 578 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 551 IPR044810 GO:0003700
Ahy17g1380 578 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 SMART WRKY_cls 402 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 41 551 - -
Ahy17g1380 578 MobiDBLite consensus disorder prediction 154 226 - -
Ahy17g1380 578 MobiDBLite consensus disorder prediction 458 578 - -
Ahy17g1380 578 SUPERFAMILY WRKY DNA-binding domain 225 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 Gene3D WRKY domain 211 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 MobiDBLite consensus disorder prediction 281 345 - -
Ahy17g1380 578 MobiDBLite consensus disorder prediction 37 68 - -
Ahy17g1380 578 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 Pfam WRKY DNA -binding domain 403 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 ProSiteProfiles WRKY domain profile. 397 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 Gene3D WRKY domain 389 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g1380 578 MobiDBLite consensus disorder prediction 472 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1380 Ahy-Chr17 24188330 24191882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1380 47 577 WRKY Transcription Factor Family AT2G38470 48.073 4.99e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g1380 WRKY 1.60E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1380 K13424 - gmx:100127393 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1380 17 24188330 24191882 Ahy17g1380 17 24188330 24191882 ECH
Ahy17g1380 17 24188330 24191882 Ahy7g1139 7 19295543 19299201 hybridization
Ahy17g1380 17 24188330 24191882 Ahy17g1380 17 24188330 24191882 PCT
Ahy17g1380 17 24188330 24191882 Ahy7g1139 7 19295543 19299201 PCT
Ahy7g1139 7 19295543 19299201 Ahy17g1380 17 24188330 24191882 PCT