Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1372 ATGGAATTCCAAAGGGAAATGCAGGCAGCAAAACTGCTAAAAGCTCATAGCCACATATGGAATCATATATTCAATTTCATAAACTCTATGTCTCTTAAATGTGCTGTTGAATTAGGCATACCTGATGCCATTCACAATTATGGCCAACCCATGCCACTCTCACAACTCATTGCTTCACTACCAATCCACCCATCAAAATCCTCTTCAATCCAACGCTTGATGAGAATCTTGATCCATTCCGGAATCTTCGCCACGAAGAATGTAGCCAACGATGACCACTGCGAAGTTGGGTATGTGTTAACTGATTCATCCATGCTTCTGCTTAAGGACAATCCCTTAAGTGTGACACCCTTCTTACTTGCCATGCTTGATCCAATATTTACAAAACCATGGCATAAATTGTCCACATGGTTCCAAAGTAATAACAAGTCCACACCGTTTGAAACAGAACATGAGGAAACGCTTTGGGGTTATGCTTCCCATGATCCTAAACTTAATGAAATTTTCAATGATGCCATGGCAAGTGATGCTCGATTTGTTAGCAAGTTGTTAGTTGATGACAAGTGCAAGGGTGTGTTTGAGGGTTTGGAATCGTTGGTTGATGTTGGTGGAGGCACTGGAACTGTTGCCAAGGCCATTGCCAAGTCATTCCCACAGTTGGATTGCACTGTCTTTGACCTTCCACATGTTGCTGCTGACTTGGAAGGAAGTGACAACCTTAAATATATTGGAGGGGACATGTTTGAGGCTGTTCCTTCCTCTGATGCCATCTTGTTGAAGTCGATTTTGCATGACTGGAATGACGAAGAATGTTTACACATATTGAAAAATTGCAAGGAAGCAATCATGAGCAAAGGCAAAGGAGGGAAGGTTATTGTCATAGACATGGTAATAATGGAAGATGAGAAAAAAGGTAATGATGTTGATAAGTCTGTGGAAACACAACTCTTCTTTGACATGCTGATGATGGTGTTGGTCACAGGAAAAGAGAGAAATGAGAAAGAGTGGGCCGAACTAATATTTTCTGCTGGATTTAATAACTACAAAATAACTCCAATCTTAGGATTAAGGTCCCTCATTGAGATATATCCATAG 1095 0.4082 MEFQREMQAAKLLKAHSHIWNHIFNFINSMSLKCAVELGIPDAIHNYGQPMPLSQLIASLPIHPSKSSSIQRLMRILIHSGIFATKNVANDDHCEVGYVLTDSSMLLLKDNPLSVTPFLLAMLDPIFTKPWHKLSTWFQSNNKSTPFETEHEETLWGYASHDPKLNEIFNDAMASDARFVSKLLVDDKCKGVFEGLESLVDVGGGTGTVAKAIAKSFPQLDCTVFDLPHVAADLEGSDNLKYIGGDMFEAVPSSDAILLKSILHDWNDEECLHILKNCKEAIMSKGKGGKVIVIDMVIMEDEKKGNDVDKSVETQLFFDMLMMVLVTGKERNEKEWAELIFSAGFNNYKITPILGLRSLIEIYP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1372 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Ahy17g1372 364 Pfam O-methyltransferase domain 131 346 IPR001077 GO:0008171
Ahy17g1372 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 364 IPR016461 GO:0008168
Ahy17g1372 364 PANTHER O-METHYLTRANSFERASE 7 364 IPR016461 GO:0008168
Ahy17g1372 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 362 IPR029063 -
Ahy17g1372 364 CDD AdoMet_MTases 199 298 - -
Ahy17g1372 364 Gene3D - 3 107 IPR036388 -
Ahy17g1372 364 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Ahy17g1372 364 PANTHER O-METHYLTRANSFERASE 7 364 - -
Ahy17g1372 364 Gene3D Vaccinia Virus protein VP39 109 364 IPR029063 -
Ahy17g1372 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1372 Ahy-Chr17 23951485 23953981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1372 44 364 Monolignol Biosynthesis Gene Families AT1G51990 33.129 3.68e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1372 - K16040 aip:107609507 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1372 17 23951485 23953981 Ahy17g1372 17 23951485 23953981 ECH