Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1368 ATGGAACTCCAAAGTGAAATGCAAGCAGCTAAACTTCTTAAAGCTCAAAGCCACATTTGGAATCACATATTCAATTTCATAAATTCTATGTCCCTTAAATGTGCTGTTGACTTAAGCATACCTGAAACCATTTATAATTATGGCCAACCCATGCCACTCTCAAAGCTTATTGCTTCATTGCAAATTCATCCATCAAAATCCTCCTTCATCCATCGCTTGATGAGAATCTTGATCCATTCTGGCTTCTTCGCTACCAAGAATGTGGCCAACAATGAGCTCGAAGTCGGGTATGTTCTAACGGATTCATCTATGTTGCTACTTAAGGACAACCCCTTAAGTGTGACGCCTTTCTTGCTTGCCATGCTTGATCCCATCTTCACAAAACCATGGCATCAATTGTCTCCATGGTTTAGAAATGATGATTCTACACCATTTCAAACTGAGCATGGGATAATCTTTTTTGAGTTTTTTGGCCGTGAGCCTAAATTTAATAATCTTTACAATGACGCCATGGCAAGTGATGCTCGATTGGTTTGCAATTTGTTGCTTGATGACAAGTACAAGGGCGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACTGGAACTCTTGCAAAGGCCATTGCCAAATCATTTCCCCAATTGCAGTGCGTTGTATTCGACCAACCGCATGTTGTTGCTGGCTTCGAATTTGAAGGGACTGAGAACCTTAAATATGTTGGAGGAGACATGTTTGAGGCTATTCCTCCCTCTAATGCTATTTTGTTGAAGGTAATAAAATATTATTAG 798 0.4035 MELQSEMQAAKLLKAQSHIWNHIFNFINSMSLKCAVDLSIPETIYNYGQPMPLSKLIASLQIHPSKSSFIHRLMRILIHSGFFATKNVANNELEVGYVLTDSSMLLLKDNPLSVTPFLLAMLDPIFTKPWHQLSPWFRNDDSTPFQTEHGIIFFEFFGREPKFNNLYNDAMASDARLVCNLLLDDKYKGVFEGLESLVDVGGGTGTLAKAIAKSFPQLQCVVFDQPHVVAGFEFEGTENLKYVGGDMFEAIPPSNAILLKVIKYY* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1368 265 Gene3D Vaccinia Virus protein VP39 107 263 IPR029063 -
Ahy17g1368 265 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Ahy17g1368 265 PANTHER ORCINOL O-METHYLTRANSFERASE 7 262 - -
Ahy17g1368 265 Pfam O-methyltransferase domain 130 262 IPR001077 GO:0008171
Ahy17g1368 265 PANTHER O-METHYLTRANSFERASE 7 262 IPR016461 GO:0008168
Ahy17g1368 265 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 265 IPR016461 GO:0008168
Ahy17g1368 265 Gene3D - 2 106 IPR036388 -
Ahy17g1368 265 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 260 IPR029063 -
Ahy17g1368 265 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1368 Ahy-Chr17 23726157 23727083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1368 30 262 Monolignol Biosynthesis Gene Families AT5G54160 31.224 8.30e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1368 - K16040 aip:107609507 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1368 17 23726157 23727083 Ahy17g1368 17 23726157 23727083 ECH