Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1365 ATGGAATTCCAAAGTAGAGAACAGGGGGATAATGGTAAACTTCTTAAAGCCCAAAGTCACATATGGAATCATACTTTTAATTTTATAAACTCTATGTCTCTTAAATGTGTTGTTGAGTTAGGCATACCTGATGCTATTCACAAATATGGCAAACCTATGCCACTTTCACAACTCATTTCTTCATTGCAAATTCATCCATCAAAAACCTCCTTTGTCCATCGATTGATGAGAATCTTGGTCCATTCCAACTTCTTCACTACCAAGAATGTCACCAGCAATGACCTCGAAGTTGAAGTTGGGTATGTTCTAACCGATTCATCTATGCTATTGCTTAAGGACAACCCCTTAAGTTTGATACCTCACTTGTTTATGGCCCTAGATCCCAATATTATAAAACCATGGCATCAGATGTCCACATGGTTTAAAAATGATGATCCTACATCATTTGAAACGGAATATGGGATAACGTTTTGGGATTATGCTAGGCAAGCTCCTAAATTTAATGAACTTTTCAACGATGCCATGGCAAGTGATGCACGATTAGTTAGCAAGTTTTTACTTGATGACAAGTGCAAGGGAGTGTTTGAAGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTGTTGCAAAGGCCATTGCCAAAGCATTTCCACAGTTAGAGTGCATTGTTTTGGATCTTCCACATGTTGTTGCTGATTTGGAAGGAAATGAGAACCTTAAATATGTTGGAGGAAACATGTTTGAGGCCATTCCTCCTTCTAATGCCATTTTGTTGAAGTGGATTTTGCATGACTGGAATGACGAGGAATGTTCGAAAATACTGAGGAACTGCAAAGAGGCACTACACATGAGCAAAGGCGAAGGAAGGAAGATTATTGTTATAGACATCGTGATGGGGGATGAGAAGAGTGATCATGAGTCAATTGAAACACAACTCTTCTTTGACATGTTGATGATGGTGTTCCTAACAGGAAAGCAGAGAAATAAAGAAGAATGGGCCAACTTAATATTCTCAGCTGGTTTTAGCGACTACAAAATAATTTCAATTTTAGGAATAAGGTCTCTTATTGAGATATATCCATAG 1092 0.3846 MEFQSREQGDNGKLLKAQSHIWNHTFNFINSMSLKCVVELGIPDAIHKYGKPMPLSQLISSLQIHPSKTSFVHRLMRILVHSNFFTTKNVTSNDLEVEVGYVLTDSSMLLLKDNPLSLIPHLFMALDPNIIKPWHQMSTWFKNDDPTSFETEYGITFWDYARQAPKFNELFNDAMASDARLVSKFLLDDKCKGVFEGLESLVDVGGGTGTVAKAIAKAFPQLECIVLDLPHVVADLEGNENLKYVGGNMFEAIPPSNAILLKWILHDWNDEECSKILRNCKEALHMSKGEGRKIIVIDIVMGDEKSDHESIETQLFFDMLMMVFLTGKQRNKEEWANLIFSAGFSDYKIISILGIRSLIEIYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1365 363 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Ahy17g1365 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 361 IPR029063 -
Ahy17g1365 363 Pfam O-methyltransferase domain 134 345 IPR001077 GO:0008171
Ahy17g1365 363 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Ahy17g1365 363 PANTHER O-METHYLTRANSFERASE 12 363 - -
Ahy17g1365 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Ahy17g1365 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Ahy17g1365 363 Gene3D - 4 110 IPR036388 -
Ahy17g1365 363 PANTHER O-METHYLTRANSFERASE 12 363 IPR016461 GO:0008168
Ahy17g1365 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1365 Ahy-Chr17 23582956 23585666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1365 32 361 Monolignol Biosynthesis Gene Families AT5G54160 31.832 1.93e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1365 - K16040 aip:107609507 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1365 17 23582956 23585666 Ahy17g1365 17 23582956 23585666 ECH