Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1358 ATGTCGTTATTGACAGGAGAGTGGTTGATACGATTAATGGCCCATCTCATAGAGGCCCAAACCAAGAACCCAAGATTGAGGAAGGGATTGGGCCAAGGTTATGCCAGGACCCTTAATGTAACTAGAGTGTATCCATATTCCATACCACAAGATAACATAGCTGAAAGCCAAAAGAGTTGGGGATTCCAAAGTGGAGAGCAAGCTAACAATATGCTTAAAGCTCAATGCCACATATGGAATCATATGTATAGTTTTGTGAACACTGTTTCCCTTAAATGTGCCGTTGACTTAGACATATTTGAAACCATACACAAACATGGAAAACCCATGTCACTCTCACAACTCATTGCTTCATTGCAAATTCACCCTTCAAAAACCACCTTCATCCATCGCTTGATAAGAATCTTGACACATTCCGACTTCTTCGCAACGACAAATGTGGCCGATAACAATAATGAGATCGAAATTGGGTATGTTCTAACTGATTCGTCTATGTTGTTACTTAAGGAACACCCCTTAAGTATAAGGACTTTCTTTGTTAACTCGCTTGATCCAATTTTGACAAATCCATGGAACAAGTTGTCAACATGGTACAAAAATGAAGATCCTACGCCGTTTGAAACAGAGCATGGGATAATGGTATGGGAGTATGGTGGCCGTGAACCTAGGCTCAATCATTTGATCAATGATGCCATGGCAAGTGATGCTAGATTCATTAGCGAAATGGTGATTGAGAAGTGCAAAGGTGTGTTTGAGGGATTGGAATCATTGGTTGATGTTGGTGGAGGCAATGGAACTCTTGCAAAGGCCATTGCCAAATCATTCCCACAGTTGGAGTGCACTGTGCTTGATCAGCCACATGTTGTTGCTGACTTGGAAGGAAGTGACAACCTTAAATATGTTGGAGGGAACATGTTTGAGGCCATTCCTCCTGCGGATGCTGTTTTGATGAAGGGGATTTTGCATGACTGGAATGATAAAGAATGCATTAACATATTGAAGAAAAGCAATGAAGCAATTCTGAGCAAAGGCAAAGAAGGGAAATTGATCATTATAGACATGGTAGTTCAGGAAGATGAGAAGGAAGATCCTGAATTAGTGGAAACGCAACTCTTCTTTGACTTGCTCATGTTGGTTATGGCTGCCGGAAAGGAGAGAAGTGAAAAAGAATGGGCCAAGTTGTTCTTCTCTGCCGGATTCAGTGACTATAAGATAATTCCAGTTTTAGGTATGAGGTCTGTTATTGAGGTCTACCCATAA 1260 0.4119 MSLLTGEWLIRLMAHLIEAQTKNPRLRKGLGQGYARTLNVTRVYPYSIPQDNIAESQKSWGFQSGEQANNMLKAQCHIWNHMYSFVNTVSLKCAVDLDIFETIHKHGKPMSLSQLIASLQIHPSKTTFIHRLIRILTHSDFFATTNVADNNNEIEIGYVLTDSSMLLLKEHPLSIRTFFVNSLDPILTNPWNKLSTWYKNEDPTPFETEHGIMVWEYGGREPRLNHLINDAMASDARFISEMVIEKCKGVFEGLESLVDVGGGNGTLAKAIAKSFPQLECTVLDQPHVVADLEGSDNLKYVGGNMFEAIPPADAVLMKGILHDWNDKECINILKKSNEAILSKGKEGKLIIIDMVVQEDEKEDPELVETQLFFDLLMLVMAAGKERSEKEWAKLFFSAGFSDYKIIPVLGMRSVIEVYP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1358 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 173 418 IPR029063 -
Ahy17g1358 419 PANTHER O-METHYLTRANSFERASE 66 419 - -
Ahy17g1358 419 Pfam O-methyltransferase domain 191 401 IPR001077 GO:0008171
Ahy17g1358 419 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 79 419 IPR016461 GO:0008168
Ahy17g1358 419 PANTHER O-METHYLTRANSFERASE 66 419 IPR016461 GO:0008168
Ahy17g1358 419 Gene3D Vaccinia Virus protein VP39 168 419 IPR029063 -
Ahy17g1358 419 Pfam Dimerisation domain 90 137 IPR012967 GO:0046983
Ahy17g1358 419 Gene3D - 62 167 IPR036388 -
Ahy17g1358 419 SUPERFAMILY "Winged helix" DNA-binding domain 68 172 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1358 Ahy-Chr17 23097729 23101635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1358 89 406 Monolignol Biosynthesis Gene Families AT5G54160 32.722 5.53e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1358 - - ahf:112762995 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1358 17 23097729 23101635 Ahy17g1358 17 23097729 23101635 ECH
Ahy17g1358 17 23097729 23101635 Ahy7g1124 7 18375883 18377813 hybridization