Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1353 ATGGCTTCTTCAACTTCCTTTCAATGGTTGAGTCTTGTGGGAATCATTTGGCTCCAAGCCATAAATGGAACAAATACAAATTTCCCAGCTTACTCCTCACAACTAAAGCAACTCCTCTCAATATCCCAAGTTCAACTCAACAACCTTGCTTTCGCCTCGGATGCCGGAAAGCTCTTCGGCTTTTTCTCCGGCATGGCGGCGATTTACCTACCCCTTTGGCTTGTCCTAATGATTGGAACAACACTTGGTTTGGTTGGCTATGGTGTCCAATATCTCTTCATAACAAACCAAGTCTCTTCTTTGTCCTATTGGCATGTGTTCTTGCTAACAGTTATAGCCGGAAACAGCATTTGCTGGATCAACACTGTTTGCTATGTTGTCACAATTAGGAACTTCTCTTCTGATCAACAAGTTGCTGTTGGAATCACAACAAGTTACCAAGGATTAAGTGCTAAGATTTATAACACCATTGTTGATGCTATTTCCATGCACAACAAAAATAAAGCTACAACCTTTCTCCTTCTAAACTCTACTATACCATTGATTGTTGGATTAGTAGCTTCTTCTATACTTGGAGAAATTGATGCCACCACAAGGAATAGAAAAATGGGTGTTGGCTTTGTTGTTATGTTTTTCATTACAATTGCAACTGGGGTTTATTCTGTGATCACAAGCTTGGAATTTGTATCTAGCAAAATATCTCAAAAGGGTAACCTTTTTGGTATTATAGTGTCCCTTTTGATCCCTCTATTAGTCCCATTTTCAATGAAGATCAATGAACTCGTTGGATCATGGCAAACAAATAGAGAGAATTCATTAAGGGTATGTGTGGAAGAGAGCAATAATAATAATGAGGTGAAAGAGAGTGAAGATACCACAGAAGATGTTCATGATAATGAAGAAGTAATTATTAGTAGAAGTAGAGAAGAGATTGGAGTGATGTTGATGATTAGAAGAATAGATTTTTGGCTATATTTCTTTGTGTATTTCTTTGGTGCAACACTTGGTTTGGTGTTTCTTAATAATTTGGGACAAATTGCTGAGTCAAGGGGTTGCTCTGCCACTTCTTCTTTGGTGTCTTTGTCTTCATCTTTTGGATTCTTTGGAAGGCTCATGCCATCTCTTATGGACTACTTTTACAGGGGCAAGTATGTAATATCAAGACCAGGATCAATGGTAGCAATGATGGCACCAATAGCAGGTGCATTCTTCTTGCTCCTAAACAAAACACACCTAGCCCTATACATAAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATCACTTCAACTTCGGTCTCAACCACAAGTGAGTTATTTGGGACAAACAATTTCTCAGTGAACCATAACGTTGTGGTGGCAAATATTCCAATGGGCTCATTTCTCTTTGGTTACTCTGCTGCACTTGTTTACCATAATGAAGGAAATCGCCAACAACGTTATTATTCTGGGAAGTGTATTGGAATGGAATGTTATAGAGACACTTTTATCGTATGGGGTTGTCTTTGTTGGTTTGGGACTTTGTTGGCTTTGATTTTACATGTTAGAACTCGCAAGTTTTACTCATCACAAAAATGA 1578 0.3872 MASSTSFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGFFSGMAAIYLPLWLVLMIGTTLGLVGYGVQYLFITNQVSSLSYWHVFLLTVIAGNSICWINTVCYVVTIRNFSSDQQVAVGITTSYQGLSAKIYNTIVDAISMHNKNKATTFLLLNSTIPLIVGLVASSILGEIDATTRNRKMGVGFVVMFFITIATGVYSVITSLEFVSSKISQKGNLFGIIVSLLIPLLVPFSMKINELVGSWQTNRENSLRVCVEESNNNNEVKESEDTTEDVHDNEEVIISRSREEIGVMLMIRRIDFWLYFFVYFFGATLGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLMPSLMDYFYRGKYVISRPGSMVAMMAPIAGAFFLLLNKTHLALYISTAIIGVCTGAITSTSVSTTSELFGTNNFSVNHNVVVANIPMGSFLFGYSAALVYHNEGNRQQRYYSGKCIGMECYRDTFIVWGCLCWFGTLLALILHVRTRKFYSSQK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1353 525 Gene3D MFS general substrate transporter like domains 260 518 IPR036259 -
Ahy17g1353 525 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 524 - -
Ahy17g1353 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 524 - -
Ahy17g1353 525 SUPERFAMILY MFS general substrate transporter 5 519 IPR036259 -
Ahy17g1353 525 Pfam Nodulin-like 8 254 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1353 Ahy-Chr17 22842246 22844634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1353 9 525 Nodulin-like Gene Family AT2G30300 48.659 1.42e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1353 - - gmx:100808034 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1353 17 22842246 22844634 Ahy17g1353 17 22842246 22844634 ECH
Ahy17g1353 17 22842246 22844634 Ahy7g1118 7 18035925 18038352 hybridization
Ahy17g1353 17 22842246 22844634 Ahy17g1353 17 22842246 22844634 PCT
Ahy17g1353 17 22842246 22844634 Ahy7g1118 7 18035925 18038352 PCT
Ahy7g1118 7 18035925 18038352 Ahy17g1353 17 22842246 22844634 PCT