Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1350 ATGGTTTCGAGGGTTCACAAGAGAACAGGTTTTCATAGGAACCTTCAACATCTTCGCTCAATCACTAAATCCCATGCGCTATTTAAAACATCAGTGATATTGGATGCATCAGAGTATATACGGAGTCTAAAGAAAAAGCTACAAGAATCGGATGAGCTAGCAGTTTGTTCTTCTTCAGTCCAAAATTTCATTGACCATGGTCCCATGCCTATGCTTAAAGTTGAAGCACAAGAGGATGGGTTCATGATAAGGGTGCTGAGTCAAAGGAATTGCAAAGGGTTGTTGGTTTTCATATTGGAAGCGTTTGAAGAGCTTGGCCTTCAAGTGCTCCAGGCTAGGGTTTCTTGTGTAGATGCCTTTTCTTTAGAAGCAATGGGAATCAAGGTTCTAGGTTTTCGACTAGTTAGCATCGGGCGAAGTCAGGAAAAAAGGCATAAGATGATGCTGGGTAATAGTTTAGAGATAACTGAGCTGAAGGAGCAATTGAAGTCAAAGGAAATTGTTCTTACCGAGCTTAAAGAGGAGCTGTCAGTGTCAAAAGAAAAGCTGAAACTTGTGAAAGAGGATCATGAAAGGGCAGTAGAGTCTCTGGGAAAAAAGGTAAATGAACTGTCTACAATGAGCGACCAGATTATTGAGGTTACAGCAAAATTGAAACATATGGAGTCTAATCATGAAGCTGAGATCCTTGATGCTTTTGCCGAGGGTTTTGAACGTGCCGTTATTCAAGCGAAGTTCTTACATCCTGAAGAGGATTTTACCGCTTTGGATCCGAGCAAGGTGGTTCGGGATGGTCAGTTGGTTGATGATGAAGAAGTTGTGGAGGAAGAGGGTAATAATAATTTAGCCGATTAA 855 0.414 MVSRVHKRTGFHRNLQHLRSITKSHALFKTSVILDASEYIRSLKKKLQESDELAVCSSSVQNFIDHGPMPMLKVEAQEDGFMIRVLSQRNCKGLLVFILEAFEELGLQVLQARVSCVDAFSLEAMGIKVLGFRLVSIGRSQEKRHKMMLGNSLEITELKEQLKSKEIVLTELKEELSVSKEKLKLVKEDHERAVESLGKKVNELSTMSDQIIEVTAKLKHMESNHEAEILDAFAEGFERAVIQAKFLHPEEDFTALDPSKVVRDGQLVDDEEVVEEEGNNNLAD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1350 284 Coils Coil 155 207 - -
Ahy17g1350 284 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 127 - -
Ahy17g1350 284 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1350 Ahy-Chr17 22793128 22797203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1350 - - adu:107458139 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1350 17 22793128 22797203 Ahy17g1350 17 22793128 22797203 ECH
Ahy17g1350 17 22793128 22797203 Ahy20g1270 20 25048165 25050837 ECH
Ahy14g2082 14 117828546 117832382 Ahy17g1350 17 22793128 22797203 ECH
Ahy12g2186 12 107893135 107896036 Ahy17g1350 17 22793128 22797203 ECH
Ahy11g0297 11 3323198 3326553 Ahy17g1350 17 22793128 22797203 ECH
Ahy17g1350 17 22793128 22797203 Ahy11g0297 11 3323198 3326553 ECH
Ahy17g1350 17 22793128 22797203 Ahy7g1117 7 18011948 18013839 hybridization
Ahy17g1350 17 22793128 22797203 Ahy17g1350 17 22793128 22797203 PCT
Ahy17g1350 17 22793128 22797203 Ahy7g1117 7 18011948 18013839 PCT
Ahy7g1117 7 18011948 18013839 Ahy17g1350 17 22793128 22797203 PCT