Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1344 ATGGCATATTTCTCACCTTCACGTTTTTGCATGTCAATTATTTTAATTTGCATGTTTAGCATTGCATCTTCTCAATTAAGCTCAAATTATTATTACAAAACATGTCCACAAGCACTCTCCATAATAAGAAGTGCAGTGATGAGTGCAGTTGCCAAAGAGCACCGCATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCAATGGATGTGATGCATCGGTTCTATTAGATGACACATCGAGTTTTACTGGAGAGAAGACAGCTGGTCCGAATGTGAATTCTCTCCGAGGTTTTGATGTAATTGATGACATTAAAACTAAGGTTGAAGCTGCTTGTCCCAGTGTTGTTTCTTGTGCTGATATTCTTGCTCTTGCCGCACGTGATTCTGTTCTTGCATTGGGGGGTCCATCATGGAATGTTGGGTTAGGCAGAAGAGACTCAACGAGTGCAAGTAAAGATGATGCCACTAAAGATATCCCTTCCCCTTTGATGGATCTAAATCAACTTATCTCTGCTTTTTCAAATAAGGGCTTTAACACCAATGAGATGGTTGCCCTCTCAGGAGCTCACACAACAGGGGAAGCCAGATGCCAATTATTTCGAGGAAGGCTTTACAACGAAACAAGCATTGATTCAACTTTGGCAACATCACTGAGGCAGAATTGTCCAAGCACTGGCGGCGATACCAACCTTTCGCCGCTCGATACCACCACCAGTGTCCTATTTGACAATGCCTACTTTAAGAACCTTGTCAACCAAAAAGGGCTTCTACACTCTGATCAGCAACTCTTCAGTGGTGGTTCCACTGATTCTCAGGTCACCAGCTATAGCAACAACCCTGCAAGCTTCTTTGTCGACTTTGCAAACGCCATGGTCAAGATGGGAAACCTTAGCCCTTTGACAGGGAACGACGGCCAAATTCGTACTAACTGTCGCAAAATTAATTAA 957 0.4336 MAYFSPSRFCMSIILICMFSIASSQLSSNYYYKTCPQALSIIRSAVMSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKTAGPNVNSLRGFDVIDDIKTKVEAACPSVVSCADILALAARDSVLALGGPSWNVGLGRRDSTSASKDDATKDIPSPLMDLNQLISAFSNKGFNTNEMVALSGAHTTGEARCQLFRGRLYNETSIDSTLATSLRQNCPSTGGDTNLSPLDTTTSVLFDNAYFKNLVNQKGLLHSDQQLFSGGSTDSQVTSYSNNPASFFVDFANAMVKMGNLSPLTGNDGQIRTNCRKIN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1344 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Ahy17g1344 318 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 Gene3D Peroxidase, domain 2 163 297 - -
Ahy17g1344 318 PANTHER PEROXIDASE 72-RELATED 18 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PANTHER PEROXIDASE 18 318 - -
Ahy17g1344 318 Pfam Peroxidase 43 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 Gene3D - 29 315 - -
Ahy17g1344 318 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1344 318 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1344 Ahy-Chr17 22571229 22575635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1344 21 318 Peroxidase AT5G05340 62.333 1.57e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1344 K00430 - gmx:100794128 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1344 17 22571229 22575635 Ahy17g1344 17 22571229 22575635 ECH
Ahy17g1344 17 22571229 22575635 Ahy17g1337 17 22400927 22406204 ECH
Ahy17g1344 17 22571229 22575635 Ahy7g1111 7 17844146 17847927 hybridization
Ahy17g1344 17 22571229 22575635 Ahy17g1344 17 22571229 22575635 PCT
Ahy17g1344 17 22571229 22575635 Ahy7g1111 7 17844146 17847927 PCT
Ahy7g1111 7 17844146 17847927 Ahy17g1344 17 22571229 22575635 PCT