Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1342 ATGGCTCCCAATAATCTCCATCAATATATTATTAGTGTGGGTGTTATTGTTTCTTTGGCAACATTTTTGAACCCAACATACGGTGATGATGGGTTGAGTCCTGATTATTATAAGGGAGTGTGCCCTCAGGCATTGCCAACAGTACGAGCAGTTGTGAAGCAAGCAATCCATAGTGAACCACGAAATGGAGCATCTTTGTTGCGTTTGCATTTCCATGACTGCTTCGTTAATGGCTGTGACGGATCGGTTCTACTAGATGACACTCCGGAGATGAAGGGAGAAAAGACAGCAACCCCAAATAACAATTCCCTTCGAGCATTTGATGTTGTTGATGAAATCAAAGCAGCTGTCGACAAAGCTTGCAATGGTCCTCTTGTCTCTTGTGCAGATATACTTGCTCTTGCTGCTCGTGATTCTGTATTCATTATGGGAGGTAGACAATACTACTACAAAGTGTTGTTAGGCAGAAGAGATGCAACATCTGCAAGCATAGAGGATGCAAACAACCACCTTCCGTTGGCGACCACCGCCTTCTCCGATCTTCTCAGCCGATTCTTCCAGCCAAATGGGCTGGACCTCAAAGACATGGTGGTCCTCTCCGGCGCACACACAATTGGATTCGCAAAATGTGATTCTTTTAAAGCAAGGCTCTACAATGACACCAACATAGACTCAAATTTCGCAACATCATTGAAGCAATCTTGTCCTCCCAGTGGTGGTTCAAATTTGACAGCTTTAGATGTTAGCACTGCAAGTTTTGACATCAACTATTACAGTGATTTGTTGCAGAACAAGGGAGTTCTTCATTCTGATCAAGAGCTCTATAAGGGTGATGGTTGTGAGAGTGATCAGTTGGTGAAGCTTTATAGTAGTAACCCTAATGCTTTTGCTAAGGATTTTGCAACTTCCATGGTTAAGATGGGTAAGATTAAGCCTTTACTTGAAAATCAAGGAGAAATTAGATCTAGTTGCAGAAAAACCAATCGTGGTGGATATTACTAG 1002 0.4251 MAPNNLHQYIISVGVIVSLATFLNPTYGDDGLSPDYYKGVCPQALPTVRAVVKQAIHSEPRNGASLLRLHFHDCFVNGCDGSVLLDDTPEMKGEKTATPNNNSLRAFDVVDEIKAAVDKACNGPLVSCADILALAARDSVFIMGGRQYYYKVLLGRRDATSASIEDANNHLPLATTAFSDLLSRFFQPNGLDLKDMVVLSGAHTIGFAKCDSFKARLYNDTNIDSNFATSLKQSCPPSGGSNLTALDVSTASFDINYYSDLLQNKGVLHSDQELYKGDGCESDQLVKLYSSNPNAFAKDFATSMVKMGKIKPLLENQGEIRSSCRKTNRGGYY* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1342 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Ahy17g1342 333 PANTHER PEROXIDASE 72-RELATED 16 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 CDD secretory_peroxidase 31 327 IPR033905 GO:0004601|GO:0042744
Ahy17g1342 333 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Ahy17g1342 333 SUPERFAMILY Heme-dependent peroxidases 31 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 Gene3D - 35 325 - -
Ahy17g1342 333 Gene3D Peroxidase, domain 2 172 307 - -
Ahy17g1342 333 PANTHER CATIONIC PEROXIDASE 16 328 - -
Ahy17g1342 333 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy17g1342 333 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1342 Ahy-Chr17 22508535 22512945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1342 32 328 Peroxidase AT5G05340 53.488 1.79e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1342 K00430 - gmx:100816580 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1342 17 22508535 22512945 Ahy17g1342 17 22508535 22512945 ECH
Ahy17g1342 17 22508535 22512945 Ahy7g1108 7 17803370 17809810 hybridization