Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1325 ATGCCAGAGATCGAACAGGCGCCGCCGCATGCGGCGTCGGCAACTAGTAACACCTCCACATCCACCGTCACCACCTCCGCCTTATTTGGAAAATACGAGCTAGGAAGACTCCTAGGATGCGGCGCGTTCGCGAAGGTTTACTACGCGCGGAACGTGAAAACGATGCAGAGCGTGGCGATAAAGGTGATAAGCAAGAAGAAGATAATGGGAACGTCGCTGGTTTCGAACGTGAAGCGCGAGGTTTCGATCATGAGCAAGCTCAACCACCCGAACATCGTGAAGCTGCACGAGGTGCTGGCGACGAAGACCAAGATCTATTTCGTGTTGGAGTTCGTTAAAGGCGGTGAGTTATTTGCTAAGGTTTCGAAAGGGAGGTTCAGCGAGGATCTCGCCCGCAAGTATTTCCAGCAGCTTATCTCCGCCGTAGGGTACTGCCACTCGCGCGGCGTTTTCCACCGTGATTTGAAGCCGGAGAATCTCTTGCTTGATGAGAATGGGAATCTCAAGGTCTCCGATTTTGGACTCAGTGCCGTCAAAGACCAGGTGAGGTTTGATGGGTTGTTGCACACGTTGTGTGGCACTCCGGCTTACGTGGCACCGGAGATTCTGGCAAAGAAGGGCTACGACGGTGCAAAGGTTGATGTATGGTCTTGTGGGGTGATTCTCTTTGTTCTTGCAGCAGGGTACCTACCTTTCAATGATCCAAACTTGATGGTGATGTACAAGAAGATCTACAAGGGGGAGTACCGGTGTCCACGGTGGATGTCGCCGGATCTACGACGGTTCCTTTCAAGGGTTCTTGACATCAACCCCGAGACAAGGTTCACCGTTGATGAGATCACCAGGGACCCTTGGTTTAGAAAAGGCTACAAGGAGATCAAGTTTCATGAGGATTGGAATCTTGGGTCTGAGGACAAGGTGAAGGAATTGAATGCTTTTGATATAATCTCATTCTCTTCTGGTTTGAATCTTTCTGGATTGTTTGTTGGTGGTGGCGCCTCCACATCAGCGGCCGCAGAGGACACCGAGAGGCTCATGCTCAACGGTTCAGTTGAGGCGGTTTTGGCTAGGGTGGAGGAGGTGGCTGTGGCAGAGGGGCTTATAGTAAGAGGGTTGAAAGAATGTGGTGTGGAGCTAGAGGGGCAAAATAGTAATTTCGGACTTGTGGTGGAGGTTTGCCGGGTAACTGCCAACCTGGTTGTGGTGGAGGCAACGAGGAAAACCGGGGATCTTTTCGGATTTAGGGATATGTGGAGGAACAAACTGACACCTAAGCTGTTAAGTAATGCTACCACAGAAAGTGATAGCATTTCTGATTCAGCAGAGACTCAATCGGAGATTTCCGAGTCTGAGCAAGTTGCTAGTGTCTGA 1371 0.5084 MPEIEQAPPHAASATSNTSTSTVTTSALFGKYELGRLLGCGAFAKVYYARNVKTMQSVAIKVISKKKIMGTSLVSNVKREVSIMSKLNHPNIVKLHEVLATKTKIYFVLEFVKGGELFAKVSKGRFSEDLARKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQVRFDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLAAGYLPFNDPNLMVMYKKIYKGEYRCPRWMSPDLRRFLSRVLDINPETRFTVDEITRDPWFRKGYKEIKFHEDWNLGSEDKVKELNAFDIISFSSGLNLSGLFVGGGASTSAAAEDTERLMLNGSVEAVLARVEEVAVAEGLIVRGLKECGVELEGQNSNFGLVVEVCRVTANLVVVEATRKTGDLFGFRDMWRNKLTPKLLSNATTESDSISDSAETQSEISESEQVASV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1325 456 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Ahy17g1325 456 PANTHER - 1 452 - -
Ahy17g1325 456 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1325 456 Gene3D Transferase(Phosphotransferase) domain 1 112 293 - -
Ahy17g1325 456 Gene3D Phosphorylase Kinase; domain 1 21 111 - -
Ahy17g1325 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 452 - -
Ahy17g1325 456 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1325 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Ahy17g1325 456 MobiDBLite consensus disorder prediction 429 456 - -
Ahy17g1325 456 Pfam NAF domain 308 370 IPR004041 GO:0007165
Ahy17g1325 456 SUPERFAMILY Protein kinase-like (PK-like) 29 297 IPR011009 -
Ahy17g1325 456 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Ahy17g1325 456 CDD CIPK_C 311 426 - -
Ahy17g1325 456 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1325 456 Gene3D Kinase associated domain 1, KA1 306 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1325 Ahy-Chr17 21993997 21997009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1325 1 427 CBL-interacting serine-threonine protein kinases AT2G30360 63.616 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy17g1325 Pkinase 2.20E-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1325 - K12761 tcc:18591074 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1325 17 21993997 21997009 Ahy17g1325 17 21993997 21997009 ECH
Ahy17g1325 17 21993997 21997009 Ahy7g1087 7 17290395 17293411 hybridization
Ahy17g1325 17 21993997 21997009 Ahy17g1325 17 21993997 21997009 PCT
Ahy17g1325 17 21993997 21997009 Ahy7g1087 7 17290395 17293411 PCT
Ahy7g1087 7 17290395 17293411 Ahy17g1325 17 21993997 21997009 PCT