Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1318 ATGTATTCAAAGAGAGAGAACATGGAAGATGACAAAGAAGAACATGGTTATTTAGAAACCGACCCAACTGGTCGATATGGCAGGTTTGGAGAAGTTCTTGGAAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTTCTTGGGATAGAGGTAGCATGGAACCAGGTGAAGATCAACGAGGCGCTTCGAACGCCGGATGATTTGCAGCGGCTATACTCGGAGGTTCATCTTCTAAGCACCCTCAAGCACCAATCCATCATAAGATTCTATACTTCTTGGATTGATGTTGAGAACAAGGCCTTCAACTTTGTTACAGAAATGTTCACTTCAGGATCACTAAGAGAATACCGGAAGAAATATAAGCGAGTCAGCATACGAGCGATAAAGAATTGGGCTCGGCAAATCTTAGAGGGTCTTGTTTATCTACATGGCCACGATCCGCCAGTGATCCATAGGGACCTAAAATGTGACAACATATTTGTCAATGGCCATCTTGGACAGGTGAAAATCGGAGACCTGGGACTAGCTGCGATTCTTCGCGGCTCGCAGTCGGCACACAGTGTTATAGGCACGCCAGAGTTCATGGCACCGGAATTGTACGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGAATGTGTTTATTGGAAATGCTCACATCTGATTATCCATATTGTGAATGTACTAATCCAGCACAGATATACAAGAAAGTAACATCGGGAAAGTTACCAATGGCATTTTTCCGAATTGAAGACAGCGAAGCACAGAGGTTCATCGGAAGATGCCTGCTACCGGCGGCGAAGAGACCATCAGCAAAAGATTTGTTGCTTGACCCTTTCTTTGTGTCTGATGATTCTTCATCATCGTTAACAAAGTTTGGAATTCAGAACTATTCACTTTTGAATAGTGAGATGGAAAAGCTGCAACTGAGCGATGCTTTGCCTAGAACTGAAATGAAAATCACAGGGAAGCTGAATCCTGATGATACCATCTTTCTCAAAGTGCAACTTTCTGATAAGGATGGTTCCGTGAGGAATGTATATTTTCCGTTTGATATTGTGAATGATACTCCGATGGATGTTGCGACGGAGATGGTGAAAGAACTGGAGATTGGTGATTGGGAGCCTTTTGAAATTGCGAATATGATCGATGGCGAAGTATCTGCTCTGTTACCACGACGGAGGGCGAGTAATCATGATGAATACGACGACGACGGAGGATCTCATCATTATTTTCGCTCCTCTTCTTGCTCCTCCTCCCAAGACTCAATGGCAAGTCTTGTTCCATTATCTGAGGCCATGCCTAATGAATATTACTGGCTCCATGATGATTTATTTGACGACACTAGTTCACAAGGAACGTATTCCAACCTGAACTATCATTCAGCAGATGAACTTGACTATGTCTATAATAATTTACCTTCTTCTACCAAGAAGGACAAAATCCCCATCATGAAGAGTACTCACAAGTGCACAAGATTTTCCCCACAAGATTTATTTCCAACTTCATCACAACTAGCACCCTATAGTAGTAGCGTCAAGGGTAAGAGGGTGATGGAGAATGGTGGTAGCAGTAGTAGATTGACAAGGAACAGGTCATTGATCGATATAAGGAGCCAAATGTTGCACAGATCATTGGTTGAGGAAGTGCACAAGAGAAGGTTGTTTAAGACTGTTGGTGCTGTTGAGAATATTGGATTTCAAGCACCTTGTGAAGTTGAGAACGACAAGAACCATTCAAGGAGTGCCAAGGGAGAAAATGTTGCCATATAA 1785 0.4263 MYSKRENMEDDKEEHGYLETDPTGRYGRFGEVLGKGAMKTVYKAIDEVLGIEVAWNQVKINEALRTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVENKAFNFVTEMFTSGSLREYRKKYKRVSIRAIKNWARQILEGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCLLEMLTSDYPYCECTNPAQIYKKVTSGKLPMAFFRIEDSEAQRFIGRCLLPAAKRPSAKDLLLDPFFVSDDSSSSLTKFGIQNYSLLNSEMEKLQLSDALPRTEMKITGKLNPDDTIFLKVQLSDKDGSVRNVYFPFDIVNDTPMDVATEMVKELEIGDWEPFEIANMIDGEVSALLPRRRASNHDEYDDDGGSHHYFRSSSCSSSQDSMASLVPLSEAMPNEYYWLHDDLFDDTSSQGTYSNLNYHSADELDYVYNNLPSSTKKDKIPIMKSTHKCTRFSPQDLFPTSSQLAPYSSSVKGKRVMENGGSSSRLTRNRSLIDIRSQMLHRSLVEEVHKRRLFKTVGAVENIGFQAPCEVENDKNHSRSAKGENVAI* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1318 594 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 587 - -
Ahy17g1318 594 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1318 594 MobiDBLite consensus disorder prediction 1 20 - -
Ahy17g1318 594 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1318 594 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
Ahy17g1318 594 CDD STKc_WNK 25 285 - -
Ahy17g1318 594 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 3 587 - -
Ahy17g1318 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Ahy17g1318 594 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1318 594 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Ahy17g1318 594 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1318 Ahy-Chr17 21655383 21658758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1318 17 585 MAP Kinase Kinase Kinase AT5G58350 58.591 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy17g1318 Pkinase 2.80E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1318 K08867 - gmx:100272203 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1318 17 21655383 21658758 Ahy17g1318 17 21655383 21658758 ECH
Ahy17g1318 17 21655383 21658758 Ahy7g1081 7 16985777 16988955 hybridization
Ahy17g1318 17 21655383 21658758 Ahy17g1318 17 21655383 21658758 PCT
Ahy17g1318 17 21655383 21658758 Ahy7g1081 7 16985777 16988955 PCT
Ahy7g1081 7 16985777 16988955 Ahy17g1318 17 21655383 21658758 PCT