Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1312 ATGCAAGATCCACCACCAACACCACCACCTCCAAACTCCGCTTCCCACTTACCTCCACCGGCCCCCTCCACCGCCGCAACTTCCTCAGCCTCCTCACTCTTCGTTCGCTCCGCCGCCAATGGCCACCGCCGAGCTCACTCTGAGGTCAGTTTCCGCTTACCTGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCACCGGCGGCTCCTCCACGGCCAGCCTCGACGAGATCGGATCGGAGGATGACCTGTTCACGACGTACATTGACGTGGACAAGCTCGGGAATGGCTCGGGCGGATCGGGAAACGGATCGGATCCGATTGGTAATGGTACAGAATCGGAGAAGGCGGTTCCGAGGCCGAGGCATAGGCACAGTAACTCTGTGGATGGTTCTACGACGTCGTTTGGGGAGATCATGGACGCTAAGAAAGCTATGCCTCCTGATAAGCTCGCTGAGCTTTGGACCATTGATCCCAAGCGTGCTAAGAGGATACTTGCAAATAGGCAATCTGCTGCTCGATCAAAAGAGAGAAAGGCTCGCTACATTCAAGAACTTGAGCGCAAAGTTCAGACTCTTCAAACTGAAGCCACAACCCTTTCTGCCCAGCTGACACTATACCAGAGGGACACAAATGGTCTGAGTACTGAAAACACAGAGCTTAAGCTCCGCCTGCAAGCCATGGAGCAACAAGCACAACTTCGTGATGCTCTTAATGAGGCACTGAAGAAAGAAGTCGAGAGGCTTAAGGTTGCCACTGGCGAAATGATGAGCCCCACTGAGTCTTTTAACCTTGGAATGCACCAGATGCCATTCACAGGAGCAAATTTCTTTCCGATCCAACCCCAATCAGGTCCTTCTGATCACCAGAACATGCAGTTGCCACCATTTGCTCATGCCCCATCTGGCATGCCAACGCATCAACTACAACAATCGAGTTCTCATCCACTCTCGGAAATAATGCAAAATCATATGCAGGGACTCGACATCAACAGCAAAGGACCAACTACGGTGAAGTCCGAAGGCCCATCAATTTCTGCAAGTGAGAGTAGCACTACATTCTGA 1065 0.5249 MQDPPPTPPPPNSASHLPPPAPSTAATSSASSLFVRSAANGHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFTTYIDVDKLGNGSGGSGNGSDPIGNGTESEKAVPRPRHRHSNSVDGSTTSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTNGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSPTESFNLGMHQMPFTGANFFPIQPQSGPSDHQNMQLPPFAHAPSGMPTHQLQQSSSHPLSEIMQNHMQGLDINSKGPTTVKSEGPSISASESSTTF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1312 354 Gene3D - 159 212 - -
Ahy17g1312 354 CDD bZIP_plant_RF2 161 210 IPR044759 GO:0003700|GO:0006355
Ahy17g1312 354 MobiDBLite consensus disorder prediction 329 354 - -
Ahy17g1312 354 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 351 - -
Ahy17g1312 354 MobiDBLite consensus disorder prediction 1 18 - -
Ahy17g1312 354 SMART brlzneu 156 220 IPR004827 GO:0003700|GO:0006355
Ahy17g1312 354 Coils Coil 211 255 - -
Ahy17g1312 354 MobiDBLite consensus disorder prediction 1 78 - -
Ahy17g1312 354 MobiDBLite consensus disorder prediction 95 136 - -
Ahy17g1312 354 SUPERFAMILY Leucine zipper domain 160 211 IPR046347 GO:0003700|GO:0006355
Ahy17g1312 354 Pfam bZIP transcription factor 160 217 IPR004827 GO:0003700|GO:0006355
Ahy17g1312 354 Coils Coil 176 203 - -
Ahy17g1312 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 158 221 IPR004827 GO:0003700|GO:0006355
Ahy17g1312 354 MobiDBLite consensus disorder prediction 19 36 - -
Ahy17g1312 354 PANTHER ATBZIP TRANSCRIPTION FACTOR 15 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1312 Ahy-Chr17 21401293 21404478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1312 1 354 bZIP Transcription Factor Family AT2G40620 51.870 7.81e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy17g1312 bZIP_1 6.20E-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1312 - - gmx:778172 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1312 17 21401293 21404478 Ahy17g1312 17 21401293 21404478 ECH
Ahy17g1312 17 21401293 21404478 Ahy7g1076 7 16794748 16797799 hybridization
Ahy17g1312 17 21401293 21404478 Ahy17g1312 17 21401293 21404478 PCT
Ahy17g1312 17 21401293 21404478 Ahy7g1076 7 16794748 16797799 PCT
Ahy7g1076 7 16794748 16797799 Ahy17g1312 17 21401293 21404478 PCT