Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1307 ATGGCAGATGAAACACAAAATGATTTGAAGGAGGAGGTTTCGGAAATTGCACCATTTGATCCTTCTAAGAAGAAGAAGAAGAAGAAAATCACCATTTTGGATCCTGCTGATGATGATTCGGTAGACAAGTTGACTGAGAAGACAGAAAACCTGTCAGTTAGCTCTTCATTTGCAGTTTCTGATGGGGTTGAGACTTCCTTTTCTGGTTTGAAGAAGAAGAAGAAGAAGCCTGTTGAAATCAGTAACTTGATTGATGAGAGTGGAGATGCAAATGAAGATTTAGATGATCATGCTGAAGATGATGAAGGAGAAGGGATTTCTTTGCAGCATCGTTATCCTTGGGATGGGACTGATCGTGATTATGAGTATGAGGAGCTTCTTGGCAGGGTATTTAACATTCTAAGAGAGAATAATCCCGAACTTGCTGGAGATCGACGGAGGACAGTTATGAGGCCACCTCAAGTTCTTCGTGAAGGGACAAAGAAAACTGTGTTCGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCACGTCATGGCTTTCTTGCTTGCCGAATTGGGTACAAGTGGATCCCTAGACGGACAGCAGAGATTGGTTGTGAAGGGAAGGTTTGCCCCAAAGAACTTTGAAGGAATTCTGCGACGCTATATCAATGAATATGTCATTTGCCTCGGATGCAAGAGTCCAGACACTATACTTTCAAAGGAAAACCGTCTGTTCTTTCTCCGTTGCGAGAAGTGTGGATCTGGAAGATCGGTTGCTCCTATCAAGGCTGGTTTTGTTGCTCGCGTTGGCCGCAGGAGCACAGGAACATGA 828 0.4384 MADETQNDLKEEVSEIAPFDPSKKKKKKKITILDPADDDSVDKLTEKTENLSVSSSFAVSDGVETSFSGLKKKKKKPVEISNLIDESGDANEDLDDHAEDDEGEGISLQHRYPWDGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRSTGT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1307 275 MobiDBLite consensus disorder prediction 86 102 - -
Ahy17g1307 275 MobiDBLite consensus disorder prediction 1 40 - -
Ahy17g1307 275 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 224 259 IPR016190 GO:0003743|GO:0006413
Ahy17g1307 275 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 275 - -
Ahy17g1307 275 SMART eIF2Bneu4 145 254 IPR002735 GO:0003743|GO:0006413
Ahy17g1307 275 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 120 227 IPR016189 GO:0003743|GO:0006413
Ahy17g1307 275 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 275 IPR045196 GO:0003743|GO:0006413
Ahy17g1307 275 MobiDBLite consensus disorder prediction 1 22 - -
Ahy17g1307 275 Pfam Domain found in IF2B/IF5 144 253 IPR002735 GO:0003743|GO:0006413
Ahy17g1307 275 Gene3D - 118 260 - -
Ahy17g1307 275 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1307 Ahy-Chr17 21085344 21088877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1307 1 273 Eukaryotic Initiation Factors Gene Family AT5G20920 77.091 4.77e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1307 K03238 - gmx:100783618 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1307 17 21085344 21088877 Ahy17g1307 17 21085344 21088877 ECH
Ahy17g1307 17 21085344 21088877 Ahy7g1070 7 16436359 16439885 hybridization