Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1299 ATGGAAGAGGTTACTTTGAATTCAATTGTCAACATTTTATACCTTTCAGCAAGAAAACTATCCATGAAGTTCTATTTACCTCTACTGCATCCTTTATTTTTAAGCATTGTTGTTCTTTCTCCTCTGGTCTTTGCTGACTTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTGCGGCTATCCCCCACCGTCGCAACCTTCAATGGAATTCATCTACCAAAGTTTGTACATCTTGGGTAGGTGTCACTTGCAATTCGAATGGCACCCGTGTTGTTTCTCTCCGGCTCCCTGGAATTGGACTAGTTGGCACCATCCCGGCTGACACGCTCGGCAAGCTTGATGCTCTTAGAAATCTCAGCCTTCGTTCAAACCTACTCTTTGGAAGCCTACCCACCGATATTACTTCTCTTCCATTACTCCAAAACCTCTACCTTCAGCATAATAACCTTTCCGGTAATATGCCTACCTCATTGCCTCCCCAACTCAATGTACTTGATTTGTCTTACAATTCTTTCTCCGGTGGTATTCCAAAGACACTACAGAATTCAACACAGCTAACAAGATTGAACCTACAGAACAATTCCCTATCCGGAGAGATACCGAATCTCAATGTTGCTAAGCTCAGGCATTTGAATTTAAGCTACAACCACTTGAATGGCTCTATCCCTCCTGTTCTTAAGAACTTCCCGAATTCTTCCTTTGAAGGGAACTCTCACTTATGTGGATTGCCTCTAAAGCCATGCTCTGTAGCTCCCCCAAGACCTACGTCAGCACCACCTCCATCGTCGCCTCTTGTAAGAAAAAGCTCCAAACATAAACTGAGTAAGGCAGCTATAATCGCAATCGCTGTTGGTGGATGCGTGCTTTTGTTGTTGTTAGTTCTTGTCATTGTTCTTTGCTGTTGTTTGAAGAAAAAAGATGATGGAAATGAAAGACCTAGTAGTGTAAGTAAAGGGAAGGGTCCTAGCGTCGGAGGGAGGAGCGAGAAGCCAAAGGAAGAGTTTGGAAGTGGGGTACAAGAACCTGAGAAGAACAAATTGGTTTTCTTTGAGGGAAGTTCCTATAACTTTGATCTCGAGGATCTGTTGAGGGCTTCGGCTGAAGTTTTGGGGAAAGGTAGTTATGGTACTGCATATAAGGCTGTGTTGGAGGAGTCGACAACCGTCGTGGTTAAACGGTTGAAAGAAGTTGTGGTGAGCAAAAAGGACTTCGAACAGCAGATGGAGATCATAGGAAGAGTCGGACAGCATCCGAATGTGTTGCCACTTCGTGCATATTATTATTCAAAGGACGAGAAGCTTTTGGTTTATGACTATGTCCCAGGTGGCAATTTATCAACACTTTTGCACGGTAATAGATCAAGTGGAAGAACTCCATTAGATTGGGACTCAAGATTAAAACTCGCACTTGGAATTGCCAAAGGAATTGCTCACATACATTCTGTTGGTGGTCCAAAATTCACTCATGGAAATGTCAAAGCCTCGAATGTCCTCATCAGCCAAGAGAATGATGGGAGCATTTCTGATTTCGGCCTGACGCCACTCATGAATGTTCCCACAGCTCCCACTAGAGCTGCAGGTTACCGTGCGCCGGAAGTCATTGAAACCAGGAAGCACACCCATAAATCGGATGTGTACAGTTTCGGTGTCCTCCTTCTTGAAATGCTTACTGGGAAAGCTCCGCCAATGTCTCCAGGACGCGATGATATGGTTGATCTCCCAAGGTGGGTCCAATCGGTCGTTAGGGAGGAGTGGACGGCCGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGGCATGGCATGCGTGGCGAAGGTTCCGGATATGAGACCTACCATGGAGGAGGTAGTGAGGATGATAGAAGAGATCCGGCTATCTGACTCCGAGAACCGGCCGTCTTCCGAAGAGAATAAATCCAAGGACTCAAATGTTCAAACTACTCCATGA 1983 0.4488 MEEVTLNSIVNILYLSARKLSMKFYLPLLHPLFLSIVVLSPLVFADLSSDKQALLDFAAAIPHRRNLQWNSSTKVCTSWVGVTCNSNGTRVVSLRLPGIGLVGTIPADTLGKLDALRNLSLRSNLLFGSLPTDITSLPLLQNLYLQHNNLSGNMPTSLPPQLNVLDLSYNSFSGGIPKTLQNSTQLTRLNLQNNSLSGEIPNLNVAKLRHLNLSYNHLNGSIPPVLKNFPNSSFEGNSHLCGLPLKPCSVAPPRPTSAPPPSSPLVRKSSKHKLSKAAIIAIAVGGCVLLLLLVLVIVLCCCLKKKDDGNERPSSVSKGKGPSVGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVSKKDFEQQMEIIGRVGQHPNVLPLRAYYYSKDEKLLVYDYVPGGNLSTLLHGNRSSGRTPLDWDSRLKLALGIAKGIAHIHSVGGPKFTHGNVKASNVLISQENDGSISDFGLTPLMNVPTAPTRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPPMSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKVPDMRPTMEEVVRMIEEIRLSDSENRPSSEENKSKDSNVQTTP* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1299 660 MobiDBLite consensus disorder prediction 636 660 - -
Ahy17g1299 660 Gene3D Phosphorylase Kinase; domain 1 332 439 - -
Ahy17g1299 660 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Ahy17g1299 660 Gene3D Ribonuclease Inhibitor 48 160 IPR032675 -
Ahy17g1299 660 MobiDBLite consensus disorder prediction 636 650 - -
Ahy17g1299 660 ProSiteProfiles Protein kinase domain profile. 364 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1299 660 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Ahy17g1299 660 SUPERFAMILY L domain-like 61 248 - -
Ahy17g1299 660 PANTHER OS05G0588300 PROTEIN 15 658 - -
Ahy17g1299 660 PANTHER LRR RECEPTOR-LIKE KINASE 15 658 - -
Ahy17g1299 660 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Ahy17g1299 660 MobiDBLite consensus disorder prediction 325 339 - -
Ahy17g1299 660 MobiDBLite consensus disorder prediction 308 339 - -
Ahy17g1299 660 Gene3D Transferase(Phosphotransferase) domain 1 440 659 - -
Ahy17g1299 660 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515
Ahy17g1299 660 Pfam Leucine Rich Repeat 162 182 IPR001611 GO:0005515
Ahy17g1299 660 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Ahy17g1299 660 Pfam Protein kinase domain 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1299 660 SUPERFAMILY Protein kinase-like (PK-like) 368 642 IPR011009 -
Ahy17g1299 660 CDD STKc_IRAK 370 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1299 Ahy-Chr17 20822476 20826916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1299 32 657 Receptor kinase-like Gene Family AT5G58300 69.510 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy17g1299 Pkinase 1.40E-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1299 - - gmx:100818344 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1299 17 20822476 20826916 Ahy17g1299 17 20822476 20826916 ECH
Ahy17g1299 17 20822476 20826916 Ahy7g1065 7 16200684 16205156 hybridization
Ahy17g1299 17 20822476 20826916 Ahy17g1299 17 20822476 20826916 PCT
Ahy17g1299 17 20822476 20826916 Ahy7g1065 7 16200684 16205156 PCT
Ahy7g1065 7 16200684 16205156 Ahy17g1299 17 20822476 20826916 PCT