Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1296 ATGAATCTTTCAAAGTGTGAAGTTGTTCTGTTCTTGTGGTTTTGCTGCTATTTGCTATTGGCTACTGCTCAGAATGGAGTCACTCACCCCAATGAAGTTAAGGCGTTGAGAGCCATAAAGAACAATTTGATTGATGTCAATAGAAATTTGAGTAATTGGAATCAAGGAGATCCATGTATTAATAGATGGACAGGGGTTTTGTGTCACGACAGAAGATTTAACGATGGATATTTTCATGTTCGGGAACTGCAACTATATAGAATGAACTTGTCTGGAAAATTGGCACCGGAGATTGGCAACTTCACTTATCTGGAAATATTGGATTTTATGTGGAACAAGATAAGTGGGACCATACCAAAAGAAATTGGCAACATCATTACCCTGAAACTCTTGCTCCTGAATGGAAATAAATTAATTGGTCCACTGCCAGAAGAGCTTGGCTATTTACCAAACTTGACCCGAATGCAAATTGATCAGAACAATATCAATGGATCTATACCTTCATCATTTGCAAACCTCAATGCCTGCAAGCACTTTCACATGAACAATAATTCACTTAGCGGCCATATCCCGCCGGAGCTTTCCCAACTACCAAACCTTTTTCACCTGCTTCTTGACACAAACAACTTAACAGGAACACTTCCCCCTGATCTCTCTAAGATGCCACGCTTAAAGATTCTGCAGCTTGATAACAATAACTTTAGTGGAAGTACTATTCCCGAGTCTTATGGAGATATGTCACATTTGTTCAAACTGAGCCTTAGGAACTGCAACTTGAAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTTATTATATTGATCTCAGTCACAATCAGCTGAATGAAACAATTCCTACAAATCAGCTTTCTGGGAATATCACAACCATTGTGTTATCAAACAACAATCTCAGTGGAACTATTCCATTAAATTTTTCAAATCTTCCACGTCTTAAGAAATTGTCAATTGCAAACAATAAATTGCGTGGCAACGTTCCCTCCTCCATTTGGCAGAACAAGACTTCAAGTGCAAATGAAAGCCTTATTGTGGACTTGCAAAACAATGAGCTCAACACCATATCAGGAAGTACTACTCTTCCTCCAAATGTCACACTCCAGCTTGGGGGAAATCCTCTATGCAAAAATAACAGCTTTGCTAAGTTCTGTGGATCTCAAGGTGTAACCGGCGGGAATGGTAGCTCCGGCGTTAACTGTCCCGGTGAACCATGCTCCCCTCCTTATGAGTACTCTGTGGACTGTGTCTGTTCAGCTCCATTGTATGTTGATTACAGATTGAAAAGTCCAGGATTTGGATCAGATTTCCCTGCATACATGAGTAACTTTCAAACATACCTCACTGATGGATTGAAAGTTGAGACTAATCAGCTGCACATTACTGATTATGAATGGGAAGAAGGGCCTCGGTTGCGAATGAACTTGAAGGTTTTTCCTGCAACTGTTAACAACACCACAACTAATCAGAAGTTCAATGATAGCGAGTATTCGCGGATTAGAAGCACGTTGACAGGGTGGAATATTAGTGACAGTGACTTGTTTGGGCCTTATGAACTTATGGATCTTCCTCCTTATAGTCAGGTGATTGTGGTGTCTTCAGGTTCAGGGCTAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTTCAATTGCGGTAGCAGTTACATTATCTGCAATTGTTTCCCTTCTTATATTGAGAATCAGATTGAGAGATTATCGTATACTTTCCAAACGGCAACATGGTGGAACAAGGATCTCAATAAAAATTGAAGGTGTGAGGGTATTTGTTTTTGAAGAGTTGGCAGCAGCAACTAATAATTTCAGTGAGTCTTCTCAAGTTGGACGCGGCGGGTATGGGAAGGTTTATAAAGGCATTCTTGCTGACGGCACTGCTGTCGCCATAAAACGTGCACAGGAAGGATCACTGCAAGGTGAGAGGGAGTTTCTTACAGAAATACAGTTGCTGTCACGGCTGCATCACCGAAACCTTGTGTCTCTAATTGGATATTGTGATGAAGAGGGTGAACAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCCTTATTCAAGAACACCTCTGAGTTTTACAATGAGAATGAAGATTGCTCTAGGATCAGCTAAAGGTCTTTTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACAGAGATGTCAAGGCCAGTAATATACTATTGGACTCTAAGTTCAATGCAAAGGTTGCTGATTTTGGACTTTCGCGACTCGCCCCGGTGCCAGATGTCGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAAGGGACCCCGGGTTACCTTGATCCGGAGTATTTCTTAACTCGCAAGTTAACAGACAAGAGTGATGTTTATAGTCTTGGTGTCGTGTTTCTGGAAATTGCAACCGGAAGGGCACCAATCTCCCATGGCAAAAACATTATAAGACAGGTTACTTTGGATTACCAATCCGGCGGTCTAGTTGCAGTTATCGATGAACGCATGGGGCCTTGTCCTTCAGAATGTGTGCAACCATTTTTGACATTGGCTCTAAAGTGTTGCGAAGATGCGCCAGACGAAAGGCCTAAGATGGCAGAAGTGGTTAGAGAGCTTGAAAACATTTGGTCCATGATTCCTGAGTCTAATGGCAAAGTAGCTGAATATGTTAGCAGTGATTCAGGAACATTATTCAGTTCACAACCTTCATCATCCACCGCTTTTGCATCCGTAGAAATTTCTGGCAGTGATCTTATTAGTGGAGATATTCCAACCATCAAGCCAAGATAA 2820 0.4174 MNLSKCEVVLFLWFCCYLLLATAQNGVTHPNEVKALRAIKNNLIDVNRNLSNWNQGDPCINRWTGVLCHDRRFNDGYFHVRELQLYRMNLSGKLAPEIGNFTYLEILDFMWNKISGTIPKEIGNIITLKLLLLNGNKLIGPLPEELGYLPNLTRMQIDQNNINGSIPSSFANLNACKHFHMNNNSLSGHIPPELSQLPNLFHLLLDTNNLTGTLPPDLSKMPRLKILQLDNNNFSGSTIPESYGDMSHLFKLSLRNCNLKGPIPDLSRIPNLYYIDLSHNQLNETIPTNQLSGNITTIVLSNNNLSGTIPLNFSNLPRLKKLSIANNKLRGNVPSSIWQNKTSSANESLIVDLQNNELNTISGSTTLPPNVTLQLGGNPLCKNNSFAKFCGSQGVTGGNGSSGVNCPGEPCSPPYEYSVDCVCSAPLYVDYRLKSPGFGSDFPAYMSNFQTYLTDGLKVETNQLHITDYEWEEGPRLRMNLKVFPATVNNTTTNQKFNDSEYSRIRSTLTGWNISDSDLFGPYELMDLPPYSQVIVVSSGSGLSKGALAGIILGSIAVAVTLSAIVSLLILRIRLRDYRILSKRQHGGTRISIKIEGVRVFVFEELAAATNNFSESSQVGRGGYGKVYKGILADGTAVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSPYSRTPLSFTMRMKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFNAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLEIATGRAPISHGKNIIRQVTLDYQSGGLVAVIDERMGPCPSECVQPFLTLALKCCEDAPDERPKMAEVVRELENIWSMIPESNGKVAEYVSSDSGTLFSSQPSSSTAFASVEISGSDLISGDIPTIKPR* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1296 939 SMART LRR_typ_2 316 340 IPR003591 -
Ahy17g1296 939 SMART LRR_typ_2 221 246 IPR003591 -
Ahy17g1296 939 SMART LRR_typ_2 269 293 IPR003591 -
Ahy17g1296 939 SMART LRR_typ_2 197 220 IPR003591 -
Ahy17g1296 939 SMART LRR_typ_2 149 172 IPR003591 -
Ahy17g1296 939 SUPERFAMILY Protein kinase-like (PK-like) 598 908 IPR011009 -
Ahy17g1296 939 SMART serkin_6 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1296 939 Gene3D Ribonuclease Inhibitor 295 413 IPR032675 -
Ahy17g1296 939 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Ahy17g1296 939 Gene3D Transferase(Phosphotransferase) domain 1 689 900 - -
Ahy17g1296 939 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Ahy17g1296 939 SUPERFAMILY L domain-like 44 389 - -
Ahy17g1296 939 Gene3D Phosphorylase Kinase; domain 1 585 688 - -
Ahy17g1296 939 ProSiteProfiles Protein kinase domain profile. 613 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1296 939 Gene3D Ribonuclease Inhibitor 27 294 IPR032675 -
Ahy17g1296 939 Pfam Leucine rich repeat 150 210 IPR001611 GO:0005515
Ahy17g1296 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Ahy17g1296 939 Pfam Protein kinase domain 614 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1296 939 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 916 - -
Ahy17g1296 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 916 - -
Ahy17g1296 939 CDD STKc_IRAK 619 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1296 Ahy-Chr17 20629343 20638963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1296 9 896 Receptor kinase-like Gene Family AT5G01950 56.906 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Ahy17g1296 Pkinase 2.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1296 - - gmx:100786467 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1296 17 20629343 20638963 Ahy17g1296 17 20629343 20638963 ECH
Ahy17g1296 17 20629343 20638963 Ahy7g1063 7 16047720 16055097 hybridization