Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1293 ATGGCAAAGGGTTGCACAAACAACGATTATGAGGAGGCTAGGAAACAAAGGCTAGAAGAAAACAAGAAGCGGTTTGAGGATTTGGGAATTTCAACAATTTCAAAGAATTTGTCTGAAATTGCGAGTTCTGTTAAGAAGTCTCCGTATCGTTCTCCTAAACCGAAATCAAAGAGGGATGTTGTAGTGGAACCAAGGCGTTCTTCTCGTGTACGGAACCCAGTTCGTACATACCGTGAAGATGGTGACATAGAACTTCCAACTTTTCGGAAAAGGTCAAGGTCAAGTTCATCATGGGGAAGTTATATTGCAAGGCCACTAGATGAAATCAAGGAAGCTACAGTTGAACAAAGAGCTCGAGCTTTGGAGGCTGCGGAAAAACTCCAAAGCAATTTGCAGTCTGAGAATCCATCATTTATTAAGTCAATGGTCCGGTCTCATGTTTATAGCTGCTTTTGGTTGGGTCTTCCTTTGAGATTTTGTGCAAAACATCTCCCAAAAACTGTATGTAACATGATTTTAGAGGATGAAACTGGTAAAGAATTTGAGGCTGTTTTCATTGGCAATAGAAGTGGACTTAGTGGTGGCTGGAGAGGATTTGCATTGGAGCATAAGTTGGATGATGGTGATGCACTTGTTTTTGAATTGACTGAAAAAACAAGATTTAAGATTTATAGAATTAAAGCATTTCCAGATTCAGCTGAAGAATATGAAAAACAGATTTTGAAGGAAGAAGGAAACAAACGTGCAAAGAAAGCACTGAAAGCTAATAGTAACTCCGAATCAGAATTTGACAAGACAAAAAACCCAAAAAAAGCCATTGCAGATAAAACTAATGAAGTAGAGAGTTCTAAGGATAACCTGCCAGAACGTAACATTGATACTGAAGTTAAACCACAGGAGGTGAAGCTAAGTTATAGAACTAGGTTTACTCGGAAGAAAGTGCAAGATAAATCTAAAGGGGGAACACAAGTTGAAAATGGAGAATCAAAGGAGGCCATGAAGCCTAAATCTCAAGGAAACAAGACAAAAAAGTCAAAAGAAAGTGTTGATCATAAAATCGATAACTCGGACAATACTCAACAGGTTCTTTCCAAAAATAACCCTGTCGGACCAAAAGGTGCGAGCCTAAGCAATGAAGATGGGATTGTTCAGGATGGTGGACCAGTTGAAGAAAACAGCAAAAGTGTTTCAAAACCTAGAAAAATGCGAGCTCCAAAGCTTTTCAGAAAGAGAGTATAG 1239 0.389 MAKGCTNNDYEEARKQRLEENKKRFEDLGISTISKNLSEIASSVKKSPYRSPKPKSKRDVVVEPRRSSRVRNPVRTYREDGDIELPTFRKRSRSSSSWGSYIARPLDEIKEATVEQRARALEAAEKLQSNLQSENPSFIKSMVRSHVYSCFWLGLPLRFCAKHLPKTVCNMILEDETGKEFEAVFIGNRSGLSGGWRGFALEHKLDDGDALVFELTEKTRFKIYRIKAFPDSAEEYEKQILKEEGNKRAKKALKANSNSESEFDKTKNPKKAIADKTNEVESSKDNLPERNIDTEVKPQEVKLSYRTRFTRKKVQDKSKGGTQVENGESKEAMKPKSQGNKTKKSKESVDHKIDNSDNTQQVLSKNNPVGPKGASLSNEDGIVQDGGPVEENSKSVSKPRKMRAPKLFRKRV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1293 412 SUPERFAMILY DNA-binding pseudobarrel domain 131 226 IPR015300 -
Ahy17g1293 412 MobiDBLite consensus disorder prediction 41 70 - -
Ahy17g1293 412 ProSiteProfiles B3 DNA-binding domain profile. 138 229 IPR003340 GO:0003677
Ahy17g1293 412 Coils Coil 110 130 - -
Ahy17g1293 412 CDD B3_DNA 136 224 IPR003340 GO:0003677
Ahy17g1293 412 MobiDBLite consensus disorder prediction 329 354 - -
Ahy17g1293 412 Coils Coil 8 28 - -
Ahy17g1293 412 MobiDBLite consensus disorder prediction 53 70 - -
Ahy17g1293 412 MobiDBLite consensus disorder prediction 251 319 - -
Ahy17g1293 412 Pfam B3 DNA binding domain 138 222 IPR003340 GO:0003677
Ahy17g1293 412 MobiDBLite consensus disorder prediction 251 412 - -
Ahy17g1293 412 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 240 IPR044837 -
Ahy17g1293 412 Gene3D - 112 229 IPR015300 -
Ahy17g1293 412 MobiDBLite consensus disorder prediction 355 373 - -
Ahy17g1293 412 SMART B3_2 138 232 IPR003340 GO:0003677
Ahy17g1293 412 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 4 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1293 Ahy-Chr17 20539984 20548932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1293 10 228 B3 DNA Binding Superfamily AT5G58280 51.210 6.53e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy17g1293 B3 2.20E-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1293 - - lang:109355714 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1293 17 20539984 20548932 Ahy17g1293 17 20539984 20548932 ECH
Ahy17g1293 17 20539984 20548932 Ahy7g1062 7 16038491 16047484 hybridization