Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1290 ATGCTTGCTGCTGCTGCTTCTGCATCTAAGCATCTTCTTCAACGCGATGTTAGACCCACCACTATTTTTGCCTCTCACAGTGTAAGTGGAAATCATGTTCGGTTGCTCTTAACTGCTTCTGGCATAAGCAGAAACTCAATTCACAGAAGCATAGGAAGCAAAAATTTTGGTTTTGGAAACCATCCGCAACAACACACAACATGCCCAAGTTTGCTTTTCTCTGTAAAGGGGTTCCTCTCGGATTCATCACCTTCCTCTTCCTCGTCAAATTCATCTCCTTCACTACATGGCAGAGTAACCAGGCCTTATATACTACAAACTAGTTCAACGGTAGATGGAAGAGCATTGTTCTCAACTTCAACTAAAAATGATGATGCAGCTGCACCTAAGCAGAATGAGAGTACCAGTAACAAAAAGAATGTTTCCAGCATTGTTAAGTCAGCTTCAGGGGATCAAGTTGCTGATATGAAGATCCTTCGGACGCTTGCCAGTTACCTGTGGATGAAAGAGAATCCTGAATTTCGGTTTCGGGTTGTGGCTGCTTTGGGTTTCCTTGTTGGGGCTAAGGTTTTGAATGTTCAAGTACCTTTCTTTTTCAAGCTGGCTGTTGATTGGTTGACAACTGCCACAGGCAATGCTGATTCTCTTGCTTCTTTTACGGCTGCGAATTCAACTGCAGTGGCTCTTTTTGCGACACCAGTGGCTGTGTTGGTTGGATATGGAATTGCTCGTACCGGAGCTTCAGCGTTCAACGAATTGCGGACTGCGGTATTTTCTAAGGTAGCACTACGAACAATTCGCCTAGTATCTAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTCCGGTATCATCTAAGCCGAGAAACTGGTGGCCTAAGTAGAATAATTGATCGTGGAAGCCGTGCAATAAATTTCATACTCTCGTCTATGGTGTTTAATGTAGTCCCCACTATATTAGAGATATCTATGGTATCAGGTATATTGGCCTACAAATTTGGAGCTCCTTTTGCATGGATTACTTCTCTATCGGTTGCTGCTTATGTTATGTTTACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAAAGCCATGAATAAGGCTGATAATGATGCTAGTACAAAGGCTATTGATTCGCTGATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGCTGATAAATATGATGAGTACCTAAAGAAGTATGAGGGTGCTGCTCTGAAAACACAACGCAGTCTTGCTTTGTTAAACTTCGGTCAAAATATTATATTTAGTACAGCTCTATCAACAGCAATGGTTCTGTGTTCCTATGGGATTATGGACGGCAGGTTGACAGTTGGTGATTTGGTTATGGTCAATGGCCTTCTCTTCCAACTGTCTCTTCCACTCAACTTCCTAGGTAGTGTTTATCGCGAGACTATACAGAGTCTAGTTGACATGAAGTCCATGTTTCAGTTACTTGAGGAAACAGCAGACATTAAGGATAAAGAAGATGCAAAGCCTCTAAGATTTGATGGAGGAAGAATCGAATTTGACAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGGGTATCACTTGTTGTGCCAGCTGGTAAAAGCGTGGCAATTGTCGGAACAAGCGGAAGTGGAAAATCAACGATTCTTAGATTGATATTCAGGTTTTTTGATCCTCATTCTGGAAATATAAGGATAGATGGTCAAGATATTCAGCAGGTAACCCTTGAGAGTTTGCGGAAGCTCATCGGTGTTGTTCCTCAAGACACTGTACTTTTCAATGATACCATATTTCATAATATTCACTATGGTCGACTTTCAGCTACAGAAGAAGAGGTCTACAATGCTGCTCGGCAAGCGGCAATTCATGACACTATCATGAATTTTCCTCAGAAATATTCGACTGTTGTGGGAGAGCGAGGGCTCAAGCTAAGTGGTGGCGAGAAGCAACGTGTTGCCCTAGCTCGTGCTTTCTTAAAAGCACCTGCGATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCGCTATCGAATAACCGAACTTCCATATTCATTGCTCACAGGCTTACTACCGCAATGCAGTGTGACGAGATCATAGTTTTGGAAAATGGAAAGGTGATTGAACAAGGACCCCATGAAGTTCTCTTATCAAATGGAGGAAGATATGCACAGCTCTGGGGACAACAAAATAACACAATTGATGCAATCGATACAGCTATCAAACTTGGTGTTCAAACTTAA 2301 0.4176 MLAAAASASKHLLQRDVRPTTIFASHSVSGNHVRLLLTASGISRNSIHRSIGSKNFGFGNHPQQHTTCPSLLFSVKGFLSDSSPSSSSSNSSPSLHGRVTRPYILQTSSTVDGRALFSTSTKNDDAAAPKQNESTSNKKNVSSIVKSASGDQVADMKILRTLASYLWMKENPEFRFRVVAALGFLVGAKVLNVQVPFFFKLAVDWLTTATGNADSLASFTAANSTAVALFATPVAVLVGYGIARTGASAFNELRTAVFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGGLSRIIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYKFGAPFAWITSLSVAAYVMFTLTITQWRTKFRKAMNKADNDASTKAIDSLINYETVKYFNNEDYEADKYDEYLKKYEGAALKTQRSLALLNFGQNIIFSTALSTAMVLCSYGIMDGRLTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEETADIKDKEDAKPLRFDGGRIEFDNVHFSYLTERKILDGVSLVVPAGKSVAIVGTSGSGKSTILRLIFRFFDPHSGNIRIDGQDIQQVTLESLRKLIGVVPQDTVLFNDTIFHNIHYGRLSATEEEVYNAARQAAIHDTIMNFPQKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSLSNNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSNGGRYAQLWGQQNNTIDAIDTAIKLGVQT* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1290 766 Gene3D ABC transporter type 1, transmembrane domain 165 504 IPR036640 GO:0005524|GO:0016021
Ahy17g1290 766 Pfam ABC transporter transmembrane region 181 467 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g1290 766 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 179 480 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g1290 766 Gene3D - 507 761 IPR027417 -
Ahy17g1290 766 CDD ABC_6TM_ATM1_ABCB7 181 488 - -
Ahy17g1290 766 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 108 754 IPR039421 -
Ahy17g1290 766 Pfam ABC transporter 530 679 IPR003439 GO:0005524
Ahy17g1290 766 CDD ABCC_ATM1_transporter 514 749 - -
Ahy17g1290 766 PANTHER BNAA10G12020D PROTEIN 108 754 - -
Ahy17g1290 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 749 IPR027417 -
Ahy17g1290 766 SUPERFAMILY ABC transporter transmembrane region 173 494 IPR036640 GO:0005524|GO:0016021
Ahy17g1290 766 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 514 748 IPR003439 GO:0005524
Ahy17g1290 766 MobiDBLite consensus disorder prediction 120 143 - -
Ahy17g1290 766 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524
Ahy17g1290 766 SMART AAA_5 539 725 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1290 Ahy-Chr17 20464611 20472606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1290 407 750 Calmodulin-binding Proteins AT2G36910 38.978 6.61e-64 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1290 K05662 - gmx:100787870 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1290 17 20464611 20472606 Ahy17g1290 17 20464611 20472606 ECH
Ahy17g1290 17 20464611 20472606 Ahy7g1058 7 15949443 15957935 hybridization