Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1267 ATGAAGAGGAATCCTCAGAAAGTAAAATGGACCAAGGCGTATAGGCGGGTGCATGGAAAGGATATGACTCAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCAGAGAACGTCCTCAAGGTCATTCCAAAGATTGAAAAGATCAGAGTCACCAGGGAGGAGAGGCACCATAAGAATAGCGAATTAGCGATAGCTGAGATATATGCACTTTACAACAGAGGCGCTGCTTTGCAGCGGTTTTTTCCTCTATTGGCGGTTTTAAACCGCCACAAAATCAAATTTTGGCGGTTTAGTGAACCGTCCTGGTTATTGGCGCGGAAAAATCATTTTGCGACGGTTCTAAACCGCCGCAATATATAA 390 0.4436 MKRNPQKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIEKIRVTREERHHKNSELAIAEIYALYNRGAALQRFFPLLAVLNRHKIKFWRFSEPSWLLARKNHFATVLNRRNI* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1267 129 PANTHER 60S RIBOSOMAL PROTEIN L24 1 70 IPR000988 -
Ahy17g1267 129 Gene3D Ribosomal protein L24e 1 27 IPR038630 -
Ahy17g1267 129 PANTHER RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED 1 70 - -
Ahy17g1267 129 Pfam Ribosomal protein L24e 1 24 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1267 Ahy-Chr17 19563916 19565358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1267 1 69 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 71.014 1.28e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1267 K02896 - gmx:100778077 142.124