Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1265 ATGGCTGCTGCATCAGAATCCGATGCAAAACTACTTGAGCTCCTCAAGCTACCACAAGATGAAGAAGAAGTAGATGGCTTCTTGTTTTCTCAAATGGCATGGTCAATTGTGGTTCCAATGGCTTTGAGGACCACAATAGAGCTTGGTGTATTTGACATCATAGCAAAAGAAGGCAAAGGTGCAAAGCTCTCAGCAAAAGACATTGTTGATCACATTGGAACCAACAACCCTGAAGCAGCATCAATGTTGGATCGTCTTCTTAGGCTTCTTGCAAGTCACTCATTACTGTCTTGTTCTGTTGTTGAAGATCCAGAAAGCTCTAATAACTTGCATCACAGGCTGTATAGCCTCTCACCTGTTTCCAAATATTTTGTGGGTGATGCCGATGGTGTATCTTTGGGACCCTCGTTGTTGCTGCATCTAGATCAAGTCTTCACCCAAAGTTGGAATGAATTGAAAGGAGCGATCCTTGAAGGAGGTATACCATTCAATAGGGCTCATGGCATGCATGTTTTCGAGTATGCAAAAATTGATGGTAGGTTCAACGAGGTCTTCAACAAAGCAATGCACAACTCCTCCACTTTATTAATGAAGAGGATTCTTGATGTCTACAAAGGTTTCGACCACATCAATAAACTAGTGGATGTTGGTGGTGGTGTTGGGGCAACTATCAAATTAATCACTTCCAAACACCCTCATATTCTTGGTATCAATTTTGATTTGCCTCATGTCATAGAATGTGCCTCAGCCTATGATGATGGTGTGGAGCACATGGGAGGAGATATGTTTGAGAGTGTTCCTAATGCAGATGCCATTTTCATGAAGACAATACTTCATGATTGGGGAGATGAAGAATGCTTGAAGATATTGAAAAATTGCCTCAAGGCTATTCCGAATGATGGGAAGGTTATTGTGGTGGAAACAATGGTTTCCATTTTTCCTGAGCCAACATCTTTTGCCGAGAATGCTTTTAGAAATGATGTTATCATGATGACTCAAATGCCCGGAGGGATTGAGAGAACAAAACAAGATTTCATGGACTTAGCAAATGGATCTGGATTTAGTGGCATAAGATTTGTGTGTTGTGTCTCTAGCTTCTGGGTCATGGAGTTCTACAAGTAA 1122 0.4135 MAAASESDAKLLELLKLPQDEEEVDGFLFSQMAWSIVVPMALRTTIELGVFDIIAKEGKGAKLSAKDIVDHIGTNNPEAASMLDRLLRLLASHSLLSCSVVEDPESSNNLHHRLYSLSPVSKYFVGDADGVSLGPSLLLHLDQVFTQSWNELKGAILEGGIPFNRAHGMHVFEYAKIDGRFNEVFNKAMHNSSTLLMKRILDVYKGFDHINKLVDVGGGVGATIKLITSKHPHILGINFDLPHVIECASAYDDGVEHMGGDMFESVPNADAIFMKTILHDWGDEECLKILKNCLKAIPNDGKVIVVETMVSIFPEPTSFAENAFRNDVIMMTQMPGGIERTKQDFMDLANGSGFSGIRFVCCVSSFWVMEFYK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1265 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 373 IPR016461 GO:0008168
Ahy17g1265 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 372 IPR029063 -
Ahy17g1265 373 Gene3D Vaccinia Virus protein VP39 126 373 IPR029063 -
Ahy17g1265 373 Gene3D - 10 124 IPR036388 -
Ahy17g1265 373 Pfam O-methyltransferase domain 149 355 IPR001077 GO:0008171
Ahy17g1265 373 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Ahy17g1265 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 373 - -
Ahy17g1265 373 PANTHER O-METHYLTRANSFERASE 14 373 IPR016461 GO:0008168
Ahy17g1265 373 PIRSF O-mtase 10 373 IPR016461 GO:0008168
Ahy17g1265 373 SUPERFAMILY "Winged helix" DNA-binding domain 27 127 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1265 Ahy-Chr17 19481295 19486106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1265 31 373 Monolignol Biosynthesis Gene Families AT5G54160 49.854 7.45e-118 344