Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1262 ATGCACCACCCAACCTTGTGTAATGGATATGGTGAGCACAATTCTAACTGGTTATGGGGTGAACTGAAAGGAGCAATCTTAGAAGGAGGTATACCATTCAACAGGATTTATGGTATGAATGTGTTCGAGTATGCAAATATTGATCCACGGTTCAACGAGGTTTTCAACAAAGCTATGCTCACATCCTCCACTATATCAATGAAGAGGATTCTTGATGTCTACAAAGGCTTCGACCACATCAATAAACTGGTTGACGTTGGTGGCGGTCTTGGGGCCACTCTCAACTTGATCACTTCCAAATACCCTAATATCCAGGGTGTCAATTTTGATTTGCCTCATGTTATAGAAAATGCTCCCATCTATGCTGGTGTGGAGCACATAGGCGGAGATATGTTCGAGAGCGTTCCCAACGGGGATGCCATTTTTATTAAGATATTAAAGAATTGCCGGAAGACTATACTGAATGATGGGAAGGTGATTGTGGTAGACAAAGTTCTTCTTGCAGTGCCAGAGCAGACAAATGTTGCTAAGATGGCTTCCAGGTCTGATGTTTTCATGATGATTCAAACGCTAAAAGGAAAGGAACGAACCCACCAAGATTTCATGCATTTGGCCAAAGCATCTGGATTTAGTAGCACAACATTGCTTTGTAATGTATCCAGCTTATGGGTCATGGAGTTCTTCAATCAGTAG 693 0.4214 MHHPTLCNGYGEHNSNWLWGELKGAILEGGIPFNRIYGMNVFEYANIDPRFNEVFNKAMLTSSTISMKRILDVYKGFDHINKLVDVGGGLGATLNLITSKYPNIQGVNFDLPHVIENAPIYAGVEHIGGDMFESVPNGDAIFIKILKNCRKTILNDGKVIVVDKVLLAVPEQTNVAKMASRSDVFMMIQTLKGKERTHQDFMHLAKASGFSSTTLLCNVSSLWVMEFFNQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1262 230 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 229 IPR016461 GO:0008168
Ahy17g1262 230 Gene3D Vaccinia Virus protein VP39 52 219 IPR029063 -
Ahy17g1262 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 226 IPR029063 -
Ahy17g1262 230 Pfam O-methyltransferase domain 19 211 IPR001077 GO:0008171
Ahy17g1262 230 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 19 228 - -
Ahy17g1262 230 Gene3D - 33 70 IPR036388 -
Ahy17g1262 230 PANTHER O-METHYLTRANSFERASE 19 228 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1262 Ahy-Chr17 19332446 19334448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1262 19 230 Monolignol Biosynthesis Gene Families AT5G54160 50.222 3.65e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1262 K13066 - ahf:112762943 472.241