Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1225 ATGAATAGAACAGGGGAAGGGCAGAGACCTGGAAGACAGAGAAGAAGCAGAGATGGGGGAAGGGAGAGTGAGAGTGAGGCGGTGGGAGACAGCGAAGGCACCATCTCAGTTCTCCACGGCTGCTGCGGTGGCTCGACGGCGGTGGCTCGACCCGTGACCGATCCGTTTTTCGGTCCGGTTCACGGTTCGAATGGTCCGATCGGCCGGTTCGAACCGATTTTCAGAACATTGGGTTTGGGTGCTGTAAGAGACCTTAGGATGGGGGAGCTCATTCTGAGAGTTCCAAAATCTGCTTTGATGACAACCAGTGTTATGCAACATACAAACCTCTCTCAAGCTCTTAATAGCCACCCTTCTCTTTCTTCAACCCAGATACTGAATGTTTGCCTGTTGTATGAAGTTGGAAAAGGGAAGGCTTCCAGGTGGTATCCTTACCTCATGCATTTACCAAAGAGTTATGACATCCTAGCCATGTTTGGTGAATTCGAGAAAACTGCTCTGCAAGTGGATGAGGCTATATGGGTAACTGAAAAAGCCGTGCTAAAAGAAGCTCATGCTTTGATGGAAGATCTCAAATTTAAGCCCCAGCTTCTAACATTTAAGGCTTGGGTGTGGGCTTCTGCAACGATATCTTCCCGGACATTGCATATACCGTGGGATTCAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAAGGAGCCATCTGACATTGGGGATCTAGAGGATTTGCTATCTAGCTCTTCGATCCATGATGGTTCCTTATCAAATGAAGACAATACTACAGTCGCTGATGCAGAGCAGCTTGATTCCCAGTCTCAGAGATTAACAGATGGGGGGTTTGAAGAAGATGCGAATGCATATTGCTTTTATGCTAGGGCAAATTACAATAAAGGAGATCAGGTTCTGCTATGTTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGTTTTATCCTACAAGACAATCCAAATGATAAAGTTTTTATTCCTTTGGAACCTGCTGTGTGTTCTTCCACTTCTTGGTCCAGGGAATCATTGTACATCCATTACAATGGGAAGCCTTCCTTTGCGCTACTAGCTGCATTGCGGCTGTGGGCAACCCCTCAAATCAAGAGGAGGTCTGTTGCACATTTTGTTTATTCCGGCTCTAAAATCTCTGCAGACAATGAAATTTTCATCATGAAATGGCTATCGAAGACTTGCCATGGTGTCTTAAAGAATTTGCCAACATCTATTGAAGATGACACCTTGCTCCTGAATGCAATGGATAATAGTCAAGATTTTTGTACTTTTTTGGAGGTTACAAAACTCATGTCTTTCCGGGATGAAGTTGATACCTTCTTAGAAGTTCATAATATGAAGGGTAAATGTAGTGATAGCAATGTAGTTTTATCCAGAAAAACAAGGTGGTCTATGAATAAGTGGAAGTTGACTATTCAATGGAGAATCAATTATAAGAAAGTCCTCCTTGATTGTATCTCTTATTGTAGTCAAATATTAGATTCTCTCATGGAATAA 1545 0.433 MNRTGEGQRPGRQRRSRDGGRESESEAVGDSEGTISVLHGCCGGSTAVARPVTDPFFGPVHGSNGPIGRFEPIFRTLGLGAVRDLRMGELILRVPKSALMTTSVMQHTNLSQALNSHPSLSSTQILNVCLLYEVGKGKASRWYPYLMHLPKSYDILAMFGEFEKTALQVDEAIWVTEKAVLKEAHALMEDLKFKPQLLTFKAWVWASATISSRTLHIPWDSAGCLCPVGDLFNYDAPGKEPSDIGDLEDLLSSSSIHDGSLSNEDNTTVADAEQLDSQSQRLTDGGFEEDANAYCFYARANYNKGDQVLLCYGTYTNLELLEHYGFILQDNPNDKVFIPLEPAVCSSTSWSRESLYIHYNGKPSFALLAALRLWATPQIKRRSVAHFVYSGSKISADNEIFIMKWLSKTCHGVLKNLPTSIEDDTLLLNAMDNSQDFCTFLEVTKLMSFRDEVDTFLEVHNMKGKCSDSNVVLSRKTRWSMNKWKLTIQWRINYKKVLLDCISYCSQILDSLME* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1225 514 PANTHER PROTEIN SET DOMAIN GROUP 40 78 499 - -
Ahy17g1225 514 Pfam SET domain 78 313 IPR001214 GO:0005515
Ahy17g1225 514 Gene3D - 343 514 IPR036464 -
Ahy17g1225 514 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 78 499 - -
Ahy17g1225 514 MobiDBLite consensus disorder prediction 1 31 - -
Ahy17g1225 514 Gene3D set domain protein methyltransferase, domain 1 69 327 - -
Ahy17g1225 514 SUPERFAMILY SET domain 77 331 IPR046341 -
Ahy17g1225 514 CDD SET_LSMT 77 327 - -
Ahy17g1225 514 Pfam Rubisco LSMT substrate-binding 362 435 IPR015353 -
Ahy17g1225 514 MobiDBLite consensus disorder prediction 8 28 - -
Ahy17g1225 514 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 323 434 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1225 Ahy-Chr17 18278779 18282003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1225 84 374 NAC Transcription Factor Family AT3G56570 23.754 4.53e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy17g1225 SET 0.0001 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1225 - - ahf:112764617 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1225 17 18278779 18282003 Ahy7g0996 7 14522154 14525136 hybridization