Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1221 ATGGCACCAGTTTCATTACCCCCAGGTTTCAGGTTCCATCCAACCGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGTAAGATTGAGTTGGAGATCATTGCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGGAAGGATTTGGAGTGGTATTTCTTTAGTCCTCGAGATAGGAAGTATCCAAATGGGTCAAGAACGAACCGTGCAACAAAATCTGGGTATTGGAAGGCGACAGGGAAGGACAGAAAAGTAAATTCACAATGTCGTGCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGTGGAAGGGCACCTCATGGCTCTCGCACTGATTGGGTTATGCATGAATATCGTCTTGATGATAGAGAATGTGAAAATGCTTCTTCTGGCTTGCAGGATGCATATGCACTTTGTCGTGTGTTCAAGAAGAGTGCAGTGATAACCCCTAAAGTTGATGAGGAACATCATCATCACCATCACTATGTTAATGCTAATAATCACAATAATAGCAGCCATGCTTTGCCAATTACAAGTGATCAATCGTCAAGTATGGAGTTATATTCTGAAGGAAGGGGTGAAGATTTGGATAATAGCTCTAATTATTTGGTTCCCATCGATACTACTTGCACACTACCCCTCAACAACATGGTGATGAACAATAATAATAGTGATGCTTCTTTCAATAGTAGGGATAATAATGGGAAATGGTCACAATTTGTTTCAGAAGATCCATTGTTCAGCTTTCCAACTTCCTCCTCATCATTTGCTAATAGTTATGGATCTATAACATATCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTCACCATGCCTCCATTGGAGGTAGAGGACTTCCCTCATGTTGGAACCTCGGAGCTGAAAATGACAGAATTAACCTCGGGTGCCGCATCCGCCGTGCACGGAACCCGAAACGAAACGGATATCTTGCAGGAAATTCTTTCGGTTGCTCATGCTTCCCAGGAGTTGATAAACCACTCCAGCTACTCATCATCATGGGGTGGTGATGGTGGTGGCAACCATGAAAATTGTGCAACTCATGGAGATGATTTCACTTTCATGGTTGGTAGCACTAACTACAATAATAATAATTTGAATGACATTAACTCCATGAGATATGTTGATAGAAATTGGGAAGATCCAAACAGTTCAAGATCCATTGATATTGGATATTTGGATGAAGAATTTAAGGGAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCTACAAAAGATTTAGAAAAGAACTTCACGGAAGAGCAAAAGATTGTTCCAATAGAGGATATATCAAGCTTCCGGACAAATAATAAAGAAGAAAATGAGGTGCAAGAATCTGAGCAACACCATAGCAACAAGGAACTATTGATCAATGATTTCTCATTAGGGTTCAACCCTAATAACAACAACAGCGAGAACTTTCTAGATGATGATCATAACAACATGGATAACGATGATTACTCAAGTTCTCCAAGCTTTGAAGTCATTGAGGAAATAAGGGTCAGCCATGGATCAATGTTTGTTTCGACTCGCCGCGTCGCTGACACATTCTTCCACCAAATAGTTCCTTCACAAACCGTCCAGGTTCACCTCCTCAATCCAGTGATAACAAGCAATGAAGAAGAGACATTGATGATGATAATGGAGAGGAATCAAGGGTATTTCGGGGATTTTCTTTTCAGGACAATAGCAACTGCGTTTGTGTTCATCTTTGCACTTGTATTCGTGCATTGTGATTATTTGAAGGAAGAAGTGGAATTGGTGAAGAGAAAGAGATCATCACAATCATCATCTAAGATCATGAAATGGAGCAACAATAATAAGGTTTGGTTTGTTGGTTTCAAGAGTAGTGAGAAGGGATTTGGTGCAATTTTAAAGAAAATAGGGATTTTTCTCACAATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATGTTATTGTTAACCCTTGA 2037 0.4045 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIAEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQCRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLDDRECENASSGLQDAYALCRVFKKSAVITPKVDEEHHHHHHYVNANNHNNSSHALPITSDQSSSMELYSEGRGEDLDNSSNYLVPIDTTCTLPLNNMVMNNNNSDASFNSRDNNGKWSQFVSEDPLFSFPTSSSSFANSYGSITYPPSKVDIALECARMQHRFTMPPLEVEDFPHVGTSELKMTELTSGAASAVHGTRNETDILQEILSVAHASQELINHSSYSSSWGGDGGGNHENCATHGDDFTFMVGSTNYNNNNLNDINSMRYVDRNWEDPNSSRSIDIGYLDEEFKGERMVENLRWVGMSTKDLEKNFTEEQKIVPIEDISSFRTNNKEENEVQESEQHHSNKELLINDFSLGFNPNNNNSENFLDDDHNNMDNDDYSSSPSFEVIEEIRVSHGSMFVSTRRVADTFFHQIVPSQTVQVHLLNPVITSNEEETLMMIMERNQGYFGDFLFRTIATAFVFIFALVFVHCDYLKEEVELVKRKRSSQSSSKIMKWSNNNKVWFVGFKSSEKGFGAILKKIGIFLTISLALCTMWANHVIVNP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1221 678 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Ahy17g1221 678 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Ahy17g1221 678 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Ahy17g1221 678 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 407 - -
Ahy17g1221 678 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 407 - -
Ahy17g1221 678 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1221 Ahy-Chr17 18202779 18208290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1221 1 669 NAC Transcription Factor Family AT1G65910 44.818 8.75e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy17g1221 NAM 1.80E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1221 - - gmx:100809019 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1221 17 18202779 18208290 Ahy7g0992 7 14476541 14482824 hybridization