Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1211 ATGTCTTTCTCTTTGATGGAAGCATGCAAGAAGAGAAGGCGGTGCCCAAAGATCTTCAGCTTCCAGTCCTTCGCCGATCCCGGGTGCCCCGTCACTCCCTCCGCCGCCTTCCGCGACAACGTCAGATCGTTCCTCCGAGAGTGCGCGGAGCTCGAGGAGTACGTCGTTCAGAACAGCCCACTCTGGTGCACCCTTTTGCTCAGCGACAAGACCAACGTCATGGCACCTCTCTACACCCTCGAAGAACAAGTTTGCCAATCTTCCCACCCCTTCTGCGACCATTGCCGCTGTGCAGGTTGGAGTGGTCACTTTGTGTCAAAGAGAAGGTATCATTTCATAATTCCAATGGACAATTGGTGGAATAAACCCTTACCTGAGGATGCTATTGATAATCAGGACCACCTCTTGCATGGTGTGATTCACTGCAATGGCTATGGCCATTTGGTCTGCATTAATGGCATTGAAGGTGGCTCCAAGGTCCTCAGTGGTAGAGAGATCATGGATCTATGGGATAGGATCTGCACAAACCTTGGAGCAAGGAAAATTTCAGTGGAAGATGTTTCAAGGAAGCGATCCATGGATCTTCGCCTACTTCATGGTGTTGCATATGGCCATTCATGGTTTGGTAGGTGGGGCTACAAGTTTTGTCGCGGAAGCTTTGGAGTGACAGGCCAAACCTACTATGAAGCAATTGAAGGTCTAGGTTCCTTAGAGCTTGATGAAATAGTGAGAGATTTAAGCAAGACAAAGTGCCATAAAGAGATCAAGCAAATCATTCGCAGCTATAGAGACATGAGTGAAACTCAGATTACCACATTGAGAGATCTTCTAAGGTTCATGCTCACTGTCAAGTCTCGCGTCCCAATGTCCAAGATATCAATAACCCTCGGAGCTCCTCCTTCTTCGGCTTTCATCTCAAGAAATTCAACCAAACAAGGCTTCTTAAGTAGATCAAATCTGGCAAAGGAGAAGTCCGCAAAGTACAAGAAGTTCAGCACTGCAGTGGCTAATATGGATAGCAGGTGGCCAACAAGGAGGCTAGAGTTTGCTGCACAGGTGATTGTTGATGCACTGAAGGAGCACAAGGCAATGAACTCGGCTTCAGAGGGGATGACGCGGCAGGATGTGAGGGATGCATCTAGGCTTCATATTGGTGATACCGGCTTGCTCGATTATGTGCTGAAATCACTCAACAATGTGATTGTTGGCAACTATGTTGTTCGCCGCATGGTTAACCCCTCAACAAGGATCCTAGAATACACCATTCATGAGGTTGGCAATGGGTTTAAGTCCCCGGAAACTGTGGTTGAGCCTGAGGCAGCGGCTCTTGTAGACCCTCAAGACGAGTCATTTAGGATGCCTGGTAGTGATGTTTATTGTGATGTGTTCTACCTATACAAAAATGTGCTATTGAGATATCCGAATTCAGAACCAGTGGACTTAGCAATTCAGACAATCCTTGATAGCCGGTATTTTGTGAAGGAATGGGATTACATGGATGAGATGCAGCAGGCTTTGACATTCATCTGCCGGCTTAAGCCGAATTTCGTTGATATTAAAGCTGATTTGAGTAGGGAGCAGCCTTGTGGGGAGATTGTGATGGTTCCCCTGCATGCAACGGTTAGAGACCTGAAGCAAGCTGCAGAGGCAGCACTGAGGGATACCTACTGCATTGCAGAGAGGCTCATAGTCACTGAGATCACTGAATTGAATGGTGCAAGTGATAATGAGGTGCTATTTGGATTAATCCAATCCGGAGTGGAGCTTTCTGTGAGGGGGATTTCCATTGACTTGTGCACTCCATTGAAGTTCCAAGGTGAATCCGACAATTGGAAGGTGAGGTGTGAGTGTGGGGCACAAGACGATGATGGTGAGAGAATGGTGGCCTGCGACATATGTGAGGTCTGGCAGCACACAAGGTGTTGTGGCATTGAGGATTCTGAGACAGTGCCACCTTTGTTTGTGTGCTCCGGCTGCTGCGATTCGCTTGCCCCTCGGCAGATGGAGTCACCCTTTGCCATGGATTGTGTTGATGATTTTCTTGTTTCACCAGAGCCTACCTTGTTTCTGGAATATGAATGTGGTTACTGA 2091 0.4782 MSFSLMEACKKRRRCPKIFSFQSFADPGCPVTPSAAFRDNVRSFLRECAELEEYVVQNSPLWCTLLLSDKTNVMAPLYTLEEQVCQSSHPFCDHCRCAGWSGHFVSKRRYHFIIPMDNWWNKPLPEDAIDNQDHLLHGVIHCNGYGHLVCINGIEGGSKVLSGREIMDLWDRICTNLGARKISVEDVSRKRSMDLRLLHGVAYGHSWFGRWGYKFCRGSFGVTGQTYYEAIEGLGSLELDEIVRDLSKTKCHKEIKQIIRSYRDMSETQITTLRDLLRFMLTVKSRVPMSKISITLGAPPSSAFISRNSTKQGFLSRSNLAKEKSAKYKKFSTAVANMDSRWPTRRLEFAAQVIVDALKEHKAMNSASEGMTRQDVRDASRLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPSTRILEYTIHEVGNGFKSPETVVEPEAAALVDPQDESFRMPGSDVYCDVFYLYKNVLLRYPNSEPVDLAIQTILDSRYFVKEWDYMDEMQQALTFICRLKPNFVDIKADLSREQPCGEIVMVPLHATVRDLKQAAEAALRDTYCIAERLIVTEITELNGASDNEVLFGLIQSGVELSVRGISIDLCTPLKFQGESDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIEDSETVPPLFVCSGCCDSLAPRQMESPFAMDCVDDFLVSPEPTLFLEYECGY* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1211 696 SMART PHD_3 614 660 IPR001965 -
Ahy17g1211 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 668 - -
Ahy17g1211 696 ProSitePatterns Zinc finger PHD-type signature. 615 659 IPR019786 -
Ahy17g1211 696 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 602 664 IPR013083 -
Ahy17g1211 696 SUPERFAMILY FYVE/PHD zinc finger 606 665 IPR011011 -
Ahy17g1211 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 668 - -
Ahy17g1211 696 CDD PHD_MMD1_like 615 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1211 Ahy-Chr17 17923829 17927189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1211 10 665 PHD Transcription Factor Family AT5G22260 32.062 2.43e-118 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1211 - - mtr:MTR_5g077750 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1211 17 17923829 17927189 Ahy17g1211 17 17923829 17927189 ECH
Ahy17g1211 17 17923829 17927189 Ahy7g0978 7 14102952 14106352 hybridization