Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1210 ATGGTGTTGCCTCAATCGACATGCAATCTCATGTCAGCAAAGAATAAGCAAGTGGCCCAACCTGAAATCCAGAAGCCTAGATGGCTTGATGCTTTCCTGAGAAACAAGTTTTTTGAGCAGTGCAAGGATCATCCACAGCGCAAGAATGAGTTGAACAAATACTGTATAGACTGTGATCAGGCAGTTTGCCAGTATTGCATTTCATTAGGTCATCAAGACCACATCACACTTAAGGTCTACAGACATGTTTACAAAGATGTTGTCTCCATTGGTACTATGGATAAGTATATTGACTGCTCAGAAATTCAGCGCTACAAATCCAACAAGCGATTGGTTATTTCTCTGAATCCTCTCCCGCACAGTGGTTCGACATCAAACAATGAGGCATCATGCAATACCTGCACAAGAAAGTTGAATGAACCGAATCTATATCGCTACTGCTCCATTTCTTGCAAGGTTAAAGCTATTTCGCCAGAACCTAATGATTTGGTTCCTGCCGTAATTCCTGACCAGAACCAGAATGCTCCTCAGGAAGGAATGGATATTCCTACTCAGGAAAGACCAGAGGCAAATGCCGAATTCCCAAGGCCACGAAAGAGAAGAAGAAAGGGAACACCACATCGAGCTCCATTCTTCTAA 639 0.4304 MVLPQSTCNLMSAKNKQVAQPEIQKPRWLDAFLRNKFFEQCKDHPQRKNELNKYCIDCDQAVCQYCISLGHQDHITLKVYRHVYKDVVSIGTMDKYIDCSEIQRYKSNKRLVISLNPLPHSGSTSNNEASCNTCTRKLNEPNLYRYCSISCKVKAISPEPNDLVPAVIPDQNQNAPQEGMDIPTQERPEANAEFPRPRKRRRKGTPHRAPFF* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1210 212 MobiDBLite consensus disorder prediction 197 212 - -
Ahy17g1210 212 Pfam PLATZ transcription factor 81 153 IPR006734 -
Ahy17g1210 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 212 - -
Ahy17g1210 212 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 11 212 - -
Ahy17g1210 212 MobiDBLite consensus disorder prediction 170 212 - -
Ahy17g1210 212 ProSiteProfiles Zinc finger B-box type profile. 41 79 IPR000315 GO:0008270
Ahy17g1210 212 Gene3D Classic Zinc Finger 34 94 - -
Ahy17g1210 212 SUPERFAMILY B-box zinc-binding domain 39 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1210 Ahy-Chr17 17919916 17923240 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy17g1210 PLATZ 9.70E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1210 - - adu:107457969 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1210 17 17919916 17923240 Ahy7g0977 7 14099041 14102307 hybridization