Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1183 ATGGTTCTTTCGGAAACCGCTACCGGCACCGATGTCTCAGTCCACTCTACCTTCGCCTCGCGCTACGTCCGCGCCTCCCTTCCCAGGTTTAGGATGCCGGAAAATTCCATACCAAAGGAAGCAGCGTATCAGATAATAAACGACGAGCTGATGCTGGACGGAAACCCAAGACTAAATCTGGCGTCGTTTGTAACGACATGGATGGAGCCTGAATGCGACAAACTCATCATGGCTGCCATTAACAAGAACTATGTTGATATGGACGAATACCCTGTCACCACTGAGCTCCAGAACCGATGTGTGAACATGATAGCACATCTATTCAATGCGCCACTCGAAGACGGAGAGCCGGCAGTTGGCGTCGGCACAGTTGGGTCGTCGGAGGCCATAATGTTGGCCGGGTTGGCCTTCAAACGGAAGTGGCAGAACAGAAGGAAGGAACAGGGATTGCCTTTTGACAAGCCCAACATTGTGACTGGTGCCAATGTGCAGGTTTGTTGGGAGAAATTCGCCAGGTACTTCGAGGTGGAACTCAAAGAGGTGAAGCTTCGCGATGATTACTATGTAATGGACCCTGAGTTGGCCGTGGAAATGGTTGATGAGAACACCATTTGTGTGGCTGCAATCCTTGGTTCCACTCTCAATGGAGAGTTTGAAGATGTCAAGCGCCTTAACGACCTCCTTGAGCAAAAGAATAAGGAAACAGGATGGGAAACTCCAATTCACGTGGATGCAGCAAGTGGAGGATTCATAGCGCCATTTCTATATCCAGATCTTGTGTGGGACTTTAGGTTACCATTAGTGAAGAGCATTAATGTTAGTGGCCACAAGTATGGTCTTGTCTATGCTGGCATTGGTTGGTCCATTTGGAGAAGCAAAGAAGACCTTCCTGAGGAACTCATCTTCCATATTAACTATCTTGGTGCTGATCAACCCACTTTTACTCTCAACTTCTCCAAGGGTTCTAGCCAAGTTATTGCTCAGTATTACCAACTAATTCGTTTGGGTTATGAGGGATATAAGAATGTCATGGAAAATTGTAGAGATAACATGCTAGTACTTAAAGAGGGACTCGAGAAAACAGACCGTTTTAAAATTGTATCAAAAGATAACGGCGTGCCGTTGGTGGCCTTCACACTCAAGGACAGTAGCCACTTCAACGAGTTCCAAGTCTCGGACTTCTTGCGTCGCTTTGGTTGGATAGTGCCGGCATACACCATGCCTCCAGACGCGCAGCATGTTACCGTGCTGCGTGTTGTCATAAGGGAGGACTTCTCGCGCACCCTCGCGGAGCGCCTTGTCCTCGATGTCCAGAAAGTGTTGCATGAGCTGGAATTGCTTCCTGCAAGGGTAGTGTCCAACACCACCGTGACACCCAATGGAGAAGTTGTGGACAATAATGTGAAAGTCAAGAAGAGTGAATTGGAAACACAAAGGGAAATCACTATGGTTTGGAAGAAATTTGTGATGGAGAGGAAGATGAATGAGAAGATGAATGGTGTTTGTTAG 1509 0.4751 MVLSETATGTDVSVHSTFASRYVRASLPRFRMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKEQGLPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDDYYVMDPELAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLEQKNKETGWETPIHVDAASGGFIAPFLYPDLVWDFRLPLVKSINVSGHKYGLVYAGIGWSIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLKEGLEKTDRFKIVSKDNGVPLVAFTLKDSSHFNEFQVSDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVLDVQKVLHELELLPARVVSNTTVTPNGEVVDNNVKVKKSELETQREITMVWKKFVMERKMNEKMNGVC* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1183 502 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Ahy17g1183 502 Gene3D - 361 448 - -
Ahy17g1183 502 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Ahy17g1183 502 Coils Coil 214 234 - -
Ahy17g1183 502 Gene3D - 1 65 - -
Ahy17g1183 502 Gene3D - 66 360 IPR015421 GO:0003824
Ahy17g1183 502 CDD DOPA_deC_like 59 439 - -
Ahy17g1183 502 PANTHER GLUTAMATE DECARBOXYLASE 1 502 - -
Ahy17g1183 502 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy17g1183 502 PANTHER GLUTAMATE DECARBOXYLASE 1 502 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1183 Ahy-Chr17 17547649 17552990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1183 1 502 Calmodulin-binding Proteins AT5G17330 81.386 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1183 K01580 - gmx:100796533 905.975