Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1180 ATGAACGATGTTGGAAAGAACAATAAGAAAGTGAAGGTGACCGTGGAAGAAGACGACGAGAAACGGAGGGGGAACAAGATGACGACGACGGATTCTTCTTCGTCGACGTCATCAACGGAGTCGTCTTCTTCCGACGAGAGGGAATACGAAGTACAGGACCTCCGTGACCGGCTGAAATCGTCGCGAGGAAGCAGGTTTGACCTCATAGAGAACGAGTTCGGACTCAACTCGGCTCGGAGGAAGTTCAGTCGTCAAGCTCTACTCGATGGAATCCGAGGCATCTCCAAGGGCGCTGTCATCCACCCAGAAAACAGGTGGTATCGATTATGGACAAAATTCATATTGGTATGGGCAGTGTACTCATCCTTTTTCACTCCAATGGAGTTTGGATTCTTTCGTGGCTTGCCTGAGAATCTGTTTATATTGGATATCATAGGGCAGCTAGCTTTTCTTGTGGACATAGTTTTGCAGTTCTTTCTTGCTTATAGAGATAGTCAGACCTATCGCATGGTCTACAAGCGTACCCCTATTGCTTTGCGGTACCTAAAAACTGACTTCATCTTTGATTTTCTTGGATGTATGCCTTGGGATATCATATTCAAGGTTTGTGGAAACAGAGAAGAAGTTAGGTACCTCTTGTGGATCAGATTATATCGGGTGCGGAAAGTCACCGAATTTTTCCATAATTTGGAGAAGGATATACGTGTTAATTACATCATTACTCGGATTGTGAAACTTTTAGTAGTTGAACTCTACTGCACCCACACTGCAGCCTGCATTTTCTACTATTTGGCTACTACACTTCCTGAATCCCAAGAAGAGTACACATGGATTGGAAGTTTACAGCTTGGTGGTTATAGTTATCAACATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACATCCTTGTATTTTGCTATCGTTACTATGGCTACTGTTGGCTATGGAGATATACATGCAGTAAACTTGAGGGAGATGATATTCATAATGATATATGTCTCATTTGACATGGTTCTTGGTGCTTATTTGATCGGTAACATGACAGCTTTGATAGTCAAGGGATCAAAAACTGAGAAATTTAGGGACAAGATGACAGATCTTATGAAATATATGAATAGAAATAGACTTGGACGGGATATCCGTGAGCAAATAAAAGGCCATCTGCGCTTACAGTTTGAGAGTAGCTATACCGAGGCTGCTGTCCTTCAGGAAATTCCCATTTCTATTCGCTCTAAGATATCTCAAACATTATACTTGCCATGCATTCAAATGGTTCCTCTTTTTAAGGGCTGTTCTTCAGAATTCATCAATCAGATAGTTACCAGGCTCCACGAGGAATTTTTTCTTCCAGGAGAGGTTATCATGGAACAAGGAAATGTCGTGGATCAACTATATTTTGTCTGTCATGGTGTGCTGGAGTTAGTAGGCACTGCTGAGGATGGGACTGAAGAAACTGTTTCACTTCTGGAACCTAACAGTTCATTTGGAGAGATATCCATTCTTTGCAACATTCCTCAACCATATACTGTTCGTGTCTGCGAACTCTGTAGGCTCCTGCGGCTTGATAAACAATCGTTTACAAATATCCTTGATATATACTTTTATGATGGAAGGAAGATATTAAACAACCTTCTTGAGGGAAAAGAGACTTCTCGTGGTAAGCAATTAGAGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAACAGTGCAGCTTTCAATGGGGATCTGTATCAGCTAAAAGGTTTAGTTAGAGCTGGAGCTGATCCCAACAAGACAGATTACGATGGAAGATCACCTTTGCATCTTGCTGCATCCAGAGGCTACGAAGACATCACACTTTTCCTTATTCAAGAAGGCGTAGACGTCAATGTTAGCGATAATTTCGGGAACACACCCTTACTTGAAGCAGTTAAGAGTGGACATGATCGTGTTGCATCTTTACTTGTTAGAGAAGGAGCCGCCATGAAGATAGAAGATGGCGGTAGTTTTCTATGCACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTACTGTCTAATGGCATGGATCCCAACTTGAAAGATTATGATTACCGAAGCCCTTTGCACGTTGCTGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCTGGAGCCAGTGTTTTTACCAAGGACAGATGGGGAAAAACCCCACTTGATGAAGCTCGAATGAGTGGAAATAAGAACCTAATCAAACTACTAGAAGATGCAAAATCTGCTCAGTTGTCAGACTTGCTATGTCCCACACAAGAACTTACAGATAAAATGCATCCACAAAAATGTACTGTGTTCCCTTTCCACCCATGGGATCCAAAAGATCATACAAAACATGGCATTGTATTATGGATTCCACATACCATTGAAGAGCTAATCAAAATGGCAGCGGATCAATTTGAGTTTCCTAGTGATTCTTGTGTTTTTATTTTATCAGAAGATGCTGGTAAAATTACTGATGTAGACATGATTAAAGATGGTCAGAAGCTCTATTTAGTTCATCAAACACATTAG 2568 0.4128 MNDVGKNNKKVKVTVEEDDEKRRGNKMTTTDSSSSTSSTESSSSDEREYEVQDLRDRLKSSRGSRFDLIENEFGLNSARRKFSRQALLDGIRGISKGAVIHPENRWYRLWTKFILVWAVYSSFFTPMEFGFFRGLPENLFILDIIGQLAFLVDIVLQFFLAYRDSQTYRMVYKRTPIALRYLKTDFIFDFLGCMPWDIIFKVCGNREEVRYLLWIRLYRVRKVTEFFHNLEKDIRVNYIITRIVKLLVVELYCTHTAACIFYYLATTLPESQEEYTWIGSLQLGGYSYQHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHLRLQFESSYTEAAVLQEIPISIRSKISQTLYLPCIQMVPLFKGCSSEFINQIVTRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLELVGTAEDGTEETVSLLEPNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKETSRGKQLESDITFHIGKQEAELALKVNSAAFNGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGYEDITLFLIQEGVDVNVSDNFGNTPLLEAVKSGHDRVASLLVREGAAMKIEDGGSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFMAKLLLEAGASVFTKDRWGKTPLDEARMSGNKNLIKLLEDAKSAQLSDLLCPTQELTDKMHPQKCTVFPFHPWDPKDHTKHGIVLWIPHTIEELIKMAADQFEFPSDSCVFILSEDAGKITDVDMIKDGQKLYLVHQTH* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat profile. 637 669 IPR002110 GO:0005515
Ahy17g1180 855 CDD CAP_ED 428 542 IPR000595 -
Ahy17g1180 855 Gene3D - 109 354 - -
Ahy17g1180 855 Gene3D - 561 668 IPR036770 -
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat region circular profile. 637 668 - -
Ahy17g1180 855 PRINTS Ankyrin repeat signature 605 620 IPR002110 GO:0005515
Ahy17g1180 855 PRINTS Ankyrin repeat signature 717 731 IPR002110 GO:0005515
Ahy17g1180 855 PANTHER POTASSIUM CHANNEL AKT1 41 854 IPR045319 GO:0005249|GO:0006813
Ahy17g1180 855 Pfam Cyclic nucleotide-binding domain 448 532 IPR000595 -
Ahy17g1180 855 MobiDBLite consensus disorder prediction 1 27 - -
Ahy17g1180 855 PANTHER POTASSIUM CHANNEL SKOR-LIKE 41 854 - -
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat region circular profile. 604 636 - -
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Ahy17g1180 855 Pfam KHA, dimerisation domain of potassium ion channel 780 850 IPR021789 -
Ahy17g1180 855 SUPERFAMILY Voltage-gated potassium channels 102 353 - -
Ahy17g1180 855 PRINTS EAG/ELK/ERG potassium channel family signature 344 353 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy17g1180 855 PRINTS EAG/ELK/ERG potassium channel family signature 300 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy17g1180 855 PRINTS EAG/ELK/ERG potassium channel family signature 252 262 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy17g1180 855 PRINTS EAG/ELK/ERG potassium channel family signature 143 153 IPR003938 GO:0005249|GO:0006813|GO:0016020
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat profile. 701 733 IPR002110 GO:0005515
Ahy17g1180 855 SMART ANK_2a 637 666 IPR002110 GO:0005515
Ahy17g1180 855 SMART ANK_2a 604 633 IPR002110 GO:0005515
Ahy17g1180 855 SMART ANK_2a 734 764 IPR002110 GO:0005515
Ahy17g1180 855 SMART ANK_2a 701 730 IPR002110 GO:0005515
Ahy17g1180 855 SMART ANK_2a 668 697 IPR002110 GO:0005515
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat region circular profile. 701 733 - -
Ahy17g1180 855 Gene3D Jelly Rolls 412 550 IPR014710 -
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat profile. 604 636 IPR002110 GO:0005515
Ahy17g1180 855 MobiDBLite consensus disorder prediction 28 42 - -
Ahy17g1180 855 ProSiteProfiles cAMP/cGMP binding motif profile. 428 548 IPR000595 -
Ahy17g1180 855 SUPERFAMILY cAMP-binding domain-like 356 546 IPR018490 -
Ahy17g1180 855 Gene3D - 669 764 IPR036770 -
Ahy17g1180 855 SUPERFAMILY Ankyrin repeat 577 756 IPR036770 -
Ahy17g1180 855 SMART cnmp_10 428 546 IPR000595 -
Ahy17g1180 855 Pfam Ion transport protein 108 353 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy17g1180 855 ProSiteProfiles KHA domain profile. 780 855 IPR021789 -
Ahy17g1180 855 MobiDBLite consensus disorder prediction 1 49 - -
Ahy17g1180 855 Pfam Ankyrin repeats (3 copies) 674 755 IPR002110 GO:0005515
Ahy17g1180 855 Pfam Ankyrin repeats (3 copies) 579 666 IPR002110 GO:0005515
Ahy17g1180 855 Gene3D Helix hairpin bin 355 411 - -
Ahy17g1180 855 ProSiteProfiles Ankyrin repeat region circular profile. 668 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1180 Ahy-Chr17 17485702 17492994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1180 675 769 Ion Channels AT5G37500 34.711 2.34e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1180 K21867 - gmx:100814385 1477.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1180 17 17485702 17492994 Ahy17g1180 17 17485702 17492994 ECH
Ahy17g1180 17 17485702 17492994 Ahy7g0956 7 13549731 13556833 hybridization