Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1176 ATGGATGCACAAGCTAAGAAAAAGGCAGCTTTTCGTGCTAAATTGGCCCAGAAGAAGGAAAAGCGTATAGATTCTCCCCTTGTAAGGTATAATGAATTCAATCAACCTGTTTGTCGGGTTTGTGATGTTGTTCTGAAGTCTGAATCTATATGGGATGCACACCAAATCTCCCGTAAGCATCGCGAGGCGATTGATAATCTTAAAGCTAATGCAGCTGGATTAACGCAGCAAAACAATGCAAAGCCTGCTGTTGGTAACAGATTTCCCAAAGCCAAACCTGAACAACCTTCCGAACCACTATCCAAAAAGCCTGAACCTTCACAAGAAGTACCTAAAGCCCAGTCGTCGTCTGTGCTTCCACCAAATTTTTTTGATGACAGTGCAAGGAAAACCGAAAAGAAATCATCTGATTCAGGAAGAAATGTGGGAGTTTCTGCTCAAAGTCAGGTGTCAAAGTTGGAGGAAAGAGGTAATTTTCGTGGTCATGATGCTGCGCCGTCAAAGGTTAGTCAAGCAACAACAGAGACTAGGCAGACCTCAGCCAAAACTTCTGATGCAGAGGACAACCAAACAAAAGGATCTCTGCCTGAAGGCTTTTTTGACAATAAGGATGCGGATTTGCGGGCACGTGGCATTAAGCCTGTGAAGCCAGATGTCAAGGATGAGTACAAGGAGTTTGAGAAGCTGATTCAAGAGGACTTGAAGGAGGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCCGTTGAACAAAAGATCTTCAGGGAGAGAGTGGAAATGTTGAAGAAAAAGAGACTGGAGCTGAAAGCAGCAAAGTCAGCAAAGCGAGGTAAAACTTGTGAGGGTGAAACCAAGGAGGAGTCAAGGCATGAAGAAGAGTCATCCAGTGATGATGAAAGTGGTGAAAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 969 0.4396 MDAQAKKKAAFRAKLAQKKEKRIDSPLVRYNEFNQPVCRVCDVVLKSESIWDAHQISRKHREAIDNLKANAAGLTQQNNAKPAVGNRFPKAKPEQPSEPLSKKPEPSQEVPKAQSSSVLPPNFFDDSARKTEKKSSDSGRNVGVSAQSQVSKLEERGNFRGHDAAPSKVSQATTETRQTSAKTSDAEDNQTKGSLPEGFFDNKDADLRARGIKPVKPDVKDEYKEFEKLIQEDLKEVDDRLEEEEIDAAEMIEEAESVEQKIFRERVEMLKKKRLELKAAKSAKRGKTCEGETKEESRHEEESSSDDESGENFAVDWRAQHL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1176 322 Coils Coil 57 77 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 280 305 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 1 20 - -
Ahy17g1176 322 PANTHER UNCHARACTERIZED 1 322 IPR040050 GO:0003676|GO:0005681|GO:0008270
Ahy17g1176 322 MobiDBLite consensus disorder prediction 108 122 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 280 322 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 71 203 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 167 191 - -
Ahy17g1176 322 MobiDBLite consensus disorder prediction 138 154 - -
Ahy17g1176 322 Pfam Zinc-finger of C2H2 type 38 60 - -
Ahy17g1176 322 Gene3D Classic Zinc Finger 31 69 - -
Ahy17g1176 322 SUPERFAMILY beta-beta-alpha zinc fingers 30 70 IPR036236 -
Ahy17g1176 322 Coils Coil 227 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1176 Ahy-Chr17 17402452 17408775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1176 1 322 C2H2 Transcription Factor Family AT3G02860 52.280 4.66e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1176 K13104 - gmx:100808515 406.757