Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1107 ATGATGGGGTTCTCCCAAGGAATCTCCACTGATACAAGGGACCAAGATTCTCACTTCAAGAACCTCAAAGACAGAAACTTTTTGGGAAAACTGATATGGGACTTTGCATTTGCATGTGTTGCTTCGCCATGCACTTGTAGCAGTGGAAAAATCGATGGCAAAGAATTCAAAAACATAACTTTGGATCACAAGAAGGCTCTGTTGCTGGCAGAATCTAATGGGGTTGGAGCAGAATTGCTGAACAATGAACCTCAATCGGTTCATTCATCTTTCAGGTTCAGCTTCCGTTCTCAGGTTGAGCTAGAATCCTTCAACATGAGTTCTTCTGCTGCTGCTGCTAAGGCAGCCTTGTTGATGGTGAATTTGGAGTGTGAGTCTCTGAAATGGAGGACAATGGAGCCATTGGAGAAGAGCATATCCCCAGTGCCCAACACTTTGATCAGGTTCAATTATCATGAAATTGTGCATGCTACTCGCAATTTCTCCAAAGGTAGAGTGTTGGGAAGAGGGGCATTGAGCTGTGTTTTTAGGGGTAAAGTTGGTATATTGAGGACAACTGTTGCAATCAAAAGGTTGGACAAAGAAGACAAAGAGTGTGCCAAGGCCTTTTGCAGAGAGTTGATGATTGCAAGTTCTCTTCACAACACAAACATTGTACCTCTTTTGGGATTTTGCATTGATTCAGAGGAAGGCTTGTTTTTGGTCTACAAATTTGTTTCAGGAGGAAGCTTAGAACATCACTTGCATGGGAGGAAGAAAAGTAGAGGTTCACCACTTCCATGGTCTGTGAGATTTAAAGTTGCAATTGGGATTGCAAAGGCCATAGCTTATTTGCATTATGGAACTGAAAGATGTGTTGTTCATAGAGATATTAAGCCTTCAAACATTTTGCTTTCCTCTAAGAAAATTCCCAAGTTATGTGATTTTGGACTAGCTACATGGACTGTTGCACCTTCAGTACCTTTTCTATGCAAAGCTGCCAAAGGAACATTTGGTTATTTGGCCCCTGAATATTTTCAACATGGAAAGGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTAGAACTCATAACTGGCAGGAAGCCAATTGAAGCAAAGAGGACTCAAGGAGAAGAGAACTTGGTCTCATGGGCTAAAGCTTTGCTACAGAAAGGGAAATTAGCTATTGAAAAGTTGGTTGATCCTCAACTCCACTATAGCAATTCGAGATTCTCGAGTCAAATAGCTCGGATGATCGAAGCGGCGGCTGCTTGTATTACATTCGAAGAATCTAGAAGGCCCGGCATATACGAGATTCTTGCGATACTAAAAGGTGAACAAGAACTTGTTCTCTCTAGGAGGAGGAAGTCTGGTTACTACACACAGTTACAACAAAATAATAGTGATTTGAAAAGTCACTTGGCTTTGGCAATGCTTGGAGTATCAGAGTTTGATGATGATGATGATGATTATCTTTCTTGCCGCTAA 1479 0.4131 MMGFSQGISTDTRDQDSHFKNLKDRNFLGKLIWDFAFACVASPCTCSSGKIDGKEFKNITLDHKKALLLAESNGVGAELLNNEPQSVHSSFRFSFRSQVELESFNMSSSAAAAKAALLMVNLECESLKWRTMEPLEKSISPVPNTLIRFNYHEIVHATRNFSKGRVLGRGALSCVFRGKVGILRTTVAIKRLDKEDKECAKAFCRELMIASSLHNTNIVPLLGFCIDSEEGLFLVYKFVSGGSLEHHLHGRKKSRGSPLPWSVRFKVAIGIAKAIAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTVAPSVPFLCKAAKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRTQGEENLVSWAKALLQKGKLAIEKLVDPQLHYSNSRFSSQIARMIEAAAACITFEESRRPGIYEILAILKGEQELVLSRRRKSGYYTQLQQNNSDLKSHLALAMLGVSEFDDDDDDYLSCR* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1107 492 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Ahy17g1107 492 Gene3D Transferase(Phosphotransferase) domain 1 239 461 - -
Ahy17g1107 492 ProSiteProfiles Protein kinase domain profile. 161 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1107 492 Pfam Protein kinase domain 162 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1107 492 PANTHER OS01G0750732 PROTEIN 11 488 - -
Ahy17g1107 492 SUPERFAMILY Protein kinase-like (PK-like) 141 440 IPR011009 -
Ahy17g1107 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Ahy17g1107 492 SMART serkin_6 161 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g1107 492 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 11 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1107 Ahy-Chr17 15201836 15204807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1107 149 468 Trihelix Transcription Factor Family AT1G70460 41.265 2.21e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy17g1107 Pkinase 3.20E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1107 - - adu:107481060 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1107 17 15201836 15204807 Ahy17g1107 17 15201836 15204807 ECH
Ahy17g1107 17 15201836 15204807 Ahy7g0909 7 12573587 12576591 hybridization