Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1091 ATGCGGAGGCACAGTCCAGGATACTACAGTCCGCCTAGGAGAGGGTACGGCGGCAGGGGAAGATCTCCTCCGCCGCCACCTCCTCCGTCGAGGAGGGGCTACGGTGGTGGTGGCGGCGGCGGCGGGAGGCGCGGCAGGGATAACAACAACAATGGAAGCCTTCTTGTTCGCAACATTCCCCTCGATTGCCGACCCGAGGAGCTTCGAGTCCCCTTCGAGCGGTTCGGACCCGTTCGTGATGTCTACATTCCCAAGGATTATTACTCAGGAGAACCTCGAGGCTTTGCGTTTGTGCAATTTGTGGATTCTTATGATGCTTCAGAGGCACAGTACCATATGAACAGACAAATCTTTGCCGGAAGGGAAATATCCGTTGTTGTCGCTGCTGAAACAAGAAAAAGACCAGAGGAAATGCGCCAAAGGACTAGGAGAGGACCAGCGAACTATGGGGGGAGAAGGTCTTATTATGGTCGCTCGCGCTCTCGCTCAGTATCACGCTCTCCACCTTATCACTCTGGTTCTAGAAGTAGATATCGCTCAAGATCATATTCTCCTGCTCCAAGAAGGCAAAGTGATTACTCTATTTCCCCTAGAAGGCAAGCAGAACACTCTAGATCACCTCGATCACCAAGAGGCCCCCCTAGAGAGCGAGATGCTGATCAGAAGCGCAGATCATATACTCCAGATTTTGGCAATGGTGTTGATCAGAATCAAAACAATGGATATCCTGAGAAATCTACATACAAGTCTGAGGCCGATGAAGGCCAGTGGAAGTCATCTGGACGTAGACCATCGAGGTCACCACCTGGATCCAGATCTAGGTCAAGGTCTCCTGATTTGTCTCCTAGACATTGA 855 0.517 MRRHSPGYYSPPRRGYGGRGRSPPPPPPPSRRGYGGGGGGGGRRGRDNNNNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDSYDASEAQYHMNRQIFAGREISVVVAAETRKRPEEMRQRTRRGPANYGGRRSYYGRSRSRSVSRSPPYHSGSRSRYRSRSYSPAPRRQSDYSISPRRQAEHSRSPRSPRGPPRERDADQKRRSYTPDFGNGVDQNQNNGYPEKSTYKSEADEGQWKSSGRRPSRSPPGSRSRSRSPDLSPRH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1091 284 MobiDBLite consensus disorder prediction 230 246 - -
Ahy17g1091 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 130 IPR000504 GO:0003723
Ahy17g1091 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 123 IPR000504 GO:0003723
Ahy17g1091 284 Gene3D - 46 168 IPR012677 -
Ahy17g1091 284 MobiDBLite consensus disorder prediction 132 284 - -
Ahy17g1091 284 SUPERFAMILY RNA-binding domain, RBD 48 159 IPR035979 GO:0003676
Ahy17g1091 284 MobiDBLite consensus disorder prediction 1 56 - -
Ahy17g1091 284 MobiDBLite consensus disorder prediction 261 276 - -
Ahy17g1091 284 SMART rrm1_1 53 126 IPR000504 GO:0003723
Ahy17g1091 284 MobiDBLite consensus disorder prediction 158 194 - -
Ahy17g1091 284 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 29 282 - -
Ahy17g1091 284 MobiDBLite consensus disorder prediction 195 225 - -
Ahy17g1091 284 MobiDBLite consensus disorder prediction 18 32 - -
Ahy17g1091 284 PANTHER OS02G0252100 PROTEIN 29 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1091 Ahy-Chr17 14914078 14916825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1091 27 114 Eukaryotic Initiation Factors Gene Family AT3G11400 37.500 2.44e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1091 K12900 - gmx:100804294 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1091 17 14914078 14916825 Ahy17g1091 17 14914078 14916825 ECH
Ahy17g1091 17 14914078 14916825 Ahy7g0894 7 12138831 12141580 hybridization