Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1072 ATGGTGTTGAAGAGGAAGGTAGATTATGGATTCAGGGGCTTTCAGGTCCCATTTGTACCTAGATTTCCTAGATCTGTAAGAAGGAGGAGTGCCTCTAAGAAACCTGCTAAGGATGGCCGAGCTTATGCATTTGAAATACTGGCATCTGTGGCGGGCAAGTTGTTGCTTGAGGGTGAAAGTTCTGCGTCAAGCAATGCTTCTGAAGGAAATCATCAACCTGCCATTAGCCAAGGTGTTGTCGAGAAGGGAAGTCAGGACAAAGTTAGACCATTAAAAGCAGAGGAGATTCATCGTGGAAGTAGTGTGGAGAGTATTTTTATATCTGAGGCTGGAACACCAAAGAGCGGTCAGAAGCGCCTTGAGCATGCTGAGACTGATTGTGTGCTAGAGTGCATTTCAAATAATAATAATAATAATTTCGACTGTTGGGGGAAAGATGAAACTGATGTGAAGTCCGAGATTTTCAAGTTGGAGAGTAAGTTTGGACATCATTCTCATAGGTTATCGGAAGTACCTGAAGAGTCATCTGATGGTAATGTAAAAAATGGATTTAGGGTGGAACATGGGGCGAATGGTTCAGGCTTGAAGAAATCATATTTGGATAATAAGTTTAGTGTGAAGGATCAATTAGAACTGTGTGTTAACTCTCCTGCACTAATTGACACAAAAAATAATGTTAATAGTCCATATTGTAGGAAATTGTTTCCCAACATTTCCTTTCCAAGGAATGGGAATGATATTAAGTTAGGTTTTAGAGATGATGACGAAAAACTGTTAAGATGCAAAAAAGTTTGCACCAAGCCAAAGGCTTTTAGGTCTCCTCAACTCATTGCACGCCGAAAATTGAGGAAGATGCTAGCTTATAAATACTGGAAGGCTGCACCAAAGTTGAAGGATTATGAGTATTCTAGATCTGAAGAGGGAGTTAAACCACTGTATGATACGAGGAAGATTGGTTGCAGATTTGAAAGATCACAGCATAACACACTATTCAAGAGGAGGAAATTCTTTGATCGGGGTTCAGTGCTAACATCTGATGGAGGATTCAGCAGTGATAGTGTATCTAATTTGCCTAAGAAAGGAATGGATCGAGACAGCCATAGATCATCTTCAAAACTGCATGTGTCTAAGGATTCTCATGTGAAGTTCAGCATTAAGTCATTCAAGATACCAGAGCTTTATATTGATGTTCCTGAAACTGCAACTGTTGGTTCATTAAAGAGGACAGTAATGGAGGCAGTGATGACTTTACTTGGAAGCGGAATGCATGTTGGTGTTCTTGTTCAGGGTAAAAAAGTTAGAGATGACAACAGAACTCTACTGCAGACAGGTATATGCCGTAAAGAAAAGTTGAATAAACTTGGTTTCACACTGGAGCCCAATTCTATTCAAGATTCTCCAGCTGATTGTCTCGGCGATCCTTCCCAATGTGAAACATCTCAGCCTATCAGATCCCCTGAAACTCCTGTCCAAGATTCAGGGACAACTCATGGCTTACAGGATTTGTCTTTGCCAATAAGTACAGAGAACTTTGTTGAAAGTAACCACGAGCGAACAACTTCTCCGACTGACACTATAGCTGACATAACAACACCAGATTCCAGAGTGCTAGTTGCTGTTCCACCTAGGAGCCCAGAAGCATTAGCTACGGTTCCTGTGAGTCAGAAAACTAAGCGCCTCGAACTTGTACAGCGTCGAACAAGGAGACCCTTCTCTGTTTCTGAAGTAGAAGCACTTGTGGAGGCAGTTGAGGAACTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCATAGAACTTATGTAGACCTTAAGGATAAATGGAAAACATTAGTGCACACTGCAAAAATTTCGCCTCAACAAAGGAGAGGAGAGCCAGTTCCCCAGGATCTGTTGAATAGGGTTTTGACTGCACATGCTTACTGGTGTCACCACCAAGCCAAGCAGCATGGGCATGGCAAGAACCGGGCTCTTACCATGAAGACTCCAGAAGCTTCTGCTGAAGAACTCAGTGTTGGTGCCGTCCAACCACTTGTGATTATATAG 2064 0.423 MVLKRKVDYGFRGFQVPFVPRFPRSVRRRSASKKPAKDGRAYAFEILASVAGKLLLEGESSASSNASEGNHQPAISQGVVEKGSQDKVRPLKAEEIHRGSSVESIFISEAGTPKSGQKRLEHAETDCVLECISNNNNNNFDCWGKDETDVKSEIFKLESKFGHHSHRLSEVPEESSDGNVKNGFRVEHGANGSGLKKSYLDNKFSVKDQLELCVNSPALIDTKNNVNSPYCRKLFPNISFPRNGNDIKLGFRDDDEKLLRCKKVCTKPKAFRSPQLIARRKLRKMLAYKYWKAAPKLKDYEYSRSEEGVKPLYDTRKIGCRFERSQHNTLFKRRKFFDRGSVLTSDGGFSSDSVSNLPKKGMDRDSHRSSSKLHVSKDSHVKFSIKSFKIPELYIDVPETATVGSLKRTVMEAVMTLLGSGMHVGVLVQGKKVRDDNRTLLQTGICRKEKLNKLGFTLEPNSIQDSPADCLGDPSQCETSQPIRSPETPVQDSGTTHGLQDLSLPISTENFVESNHERTTSPTDTIADITTPDSRVLVAVPPRSPEALATVPVSQKTKRLELVQRRTRRPFSVSEVEALVEAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQDLLNRVLTAHAYWCHHQAKQHGHGKNRALTMKTPEASAEELSVGAVQPLVII* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1072 687 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 622 IPR017930 -
Ahy17g1072 687 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 671 IPR031105 -
Ahy17g1072 687 Gene3D - 556 660 - -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 473 501 - -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 61 88 - -
Ahy17g1072 687 CDD SANT_TRF 569 619 - -
Ahy17g1072 687 SMART sant 567 620 IPR001005 -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 61 79 - -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 465 501 - -
Ahy17g1072 687 ProSiteProfiles Myb-like domain profile. 563 618 IPR001005 -
Ahy17g1072 687 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 671 - -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 347 373 - -
Ahy17g1072 687 SUPERFAMILY Homeodomain-like 569 649 IPR009057 -
Ahy17g1072 687 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1072 Ahy-Chr17 14387798 14393027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1072 - - lang:109356744 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1627 14 87208182 87214604 Ahy17g1072 17 14387798 14393027 ECH
Ahy13g0467 13 4808168 4812953 Ahy17g1072 17 14387798 14393027 ECH
Ahy17g1072 17 14387798 14393027 Ahy17g1072 17 14387798 14393027 ECH