Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1054 ATGACAGGATTTGGATCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGGTAGTGGTTGTGTTTTTGCTCCTTACTTCTCTTATGACCAAGCAGCAACACATTTTGCAGCTGTTCATAAGATCTATGGTGCTAGTAATGTGTCAAGGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTGCTCGCATGCAAGATCCTATTTATGGTTGTGTTTCTCATATCTATGCATTGCAGCAACAGGTTGCAAGTTTGCAAGAGGAGATAGATATTATTGGGAATCTAATGGCAAATTCTACAACTGGTGCTACCAATTGTGGCATAAATAATGTTGAAGCACCAATAACAAAAATGGAGTACTCGAACTGTGGAATACAATATCCTATGCAAGATGATGATGATGCTGTCACAACAACTAATCAATGTTATCAAAATGAAATGGCCAATAATATTCTTTCTCAAGAAGGAAGTATGACACCCCGCCAAGGCTATGGCTCACACATGGATATAGAGCTTCCAAATAATAATGGAAATGGGTTTGAAGGGCCATTTGTATTTGATGACCATCCCAACTTCAATAATAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCGTGA 684 0.386 MTGFGSSCGACKFLRRKCGSGCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPILNRSDAAITITYEALARMQDPIYGCVSHIYALQQQVASLQEEIDIIGNLMANSTTGATNCGINNVEAPITKMEYSNCGIQYPMQDDDDAVTTTNQCYQNEMANNILSQEGSMTPRQGYGSHMDIELPNNNGNGFEGPFVFDDHPNFNNNNNPLEKFLSGIDQEGFMNHP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1054 227 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Ahy17g1054 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 183 - -
Ahy17g1054 227 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Ahy17g1054 227 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1054 Ahy-Chr17 13835225 13837458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1054 1 130 AS2 family AT5G06080 60.305 7.92e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy17g1054 LOB 3.40E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1054 K13945 - gmx:100787638 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1054 17 13835225 13837458 Ahy17g1054 17 13835225 13837458 ECH