Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1047 ATGGAGGAGGAATATGATAATAAGTGGTTGATGTGGATGAAGAGAAAACAAGTGTTTGTTGGAAAGAAGAGTAGTAGTAGTAGTTACTCATACTTATCATGGGAAGAGAGGGCTTTTGCAGAAGATGCAGCAAGAGTTCTTGGTGGAAGCACATGGCCGCCAAGATCATACACTTGCAATTTCTGCCATAGACACTTCACCTCTGCTCAAGCACTTGGTGGTCACATGAATGTTCACCGAAGAGATAGGGCTAGACTCAAACAATCATCATCATCATCATTAGTGCTCACAGGAGAAGATAACCAACAACATGCTATAACAGGCTCTTACTCTTCTTCAATTAAAAGGGGGCAACAGAAGAATTTTGAAGAACCTGAAGACACCGTGATCAGTAGTTGTAAGAAGTTAAAGACTACTACCACCATTTTCTGCCTCAAGCCATGTTTAAACGATAATGGAATTGAAGACTTGGATCTTGAACTCAGGCTAGGCGCCAAACAACAAAAAGTTAACTAG 516 0.4089 MEEEYDNKWLMWMKRKQVFVGKKSSSSSYSYLSWEERAFAEDAARVLGGSTWPPRSYTCNFCHRHFTSAQALGGHMNVHRRDRARLKQSSSSSLVLTGEDNQQHAITGSYSSSIKRGQQKNFEEPEDTVISSCKKLKTTTTIFCLKPCLNDNGIEDLDLELRLGAKQQKVN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1047 171 Pfam C2H2-type zinc finger 57 81 - -
Ahy17g1047 171 SMART c2h2final6 57 79 IPR013087 -
Ahy17g1047 171 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 112 - -
Ahy17g1047 171 SUPERFAMILY beta-beta-alpha zinc fingers 54 83 IPR036236 -
Ahy17g1047 171 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Ahy17g1047 171 Gene3D Classic Zinc Finger 50 110 - -
Ahy17g1047 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Ahy17g1047 171 PANTHER OS07G0101800 PROTEIN 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1047 Ahy-Chr17 13641924 13642964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1047 20 94 C2H2 Transcription Factor Family AT2G37740 66.667 3.89e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy17g1047 zf-C2H2_6 1.40E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1047 - - aip:107608478 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1047 17 13641924 13642964 Ahy17g1047 17 13641924 13642964 ECH